Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
DSC1Q08554 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
DSC1Q08554 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DSC1Q08554 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.06■□□□□ 0.32
DSC1Q08554 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
DSC1Q08554 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
DSC1Q08554 KRT18P64-201ENST00000434946 1219 ntBASIC17.06■□□□□ 0.32
DSC1Q08554 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DSC1Q08554 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
DSC1Q08554 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DSC1Q08554 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.06■□□□□ 0.32
DSC1Q08554 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DSC1Q08554 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.06■□□□□ 0.32
DSC1Q08554 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
DSC1Q08554 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
DSC1Q08554 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.06■□□□□ 0.32
DSC1Q08554 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DSC1Q08554 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
DSC1Q08554 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.06■□□□□ 0.32
DSC1Q08554 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DSC1Q08554 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.06■□□□□ 0.32
DSC1Q08554 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DSC1Q08554 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DSC1Q08554 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DSC1Q08554 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.06■□□□□ 0.32
DSC1Q08554 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DSC1Q08554 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
DSC1Q08554 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
DSC1Q08554 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
DSC1Q08554 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DSC1Q08554 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DSC1Q08554 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DSC1Q08554 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
DSC1Q08554 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
DSC1Q08554 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.05■□□□□ 0.32
DSC1Q08554 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DSC1Q08554 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DSC1Q08554 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
DSC1Q08554 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
DSC1Q08554 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
DSC1Q08554 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
DSC1Q08554 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DSC1Q08554 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.05■□□□□ 0.32
DSC1Q08554 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.05■□□□□ 0.32
DSC1Q08554 AL442647.2-201ENST00000429864 857 ntBASIC17.05■□□□□ 0.32
DSC1Q08554 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.05■□□□□ 0.32
DSC1Q08554 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.05■□□□□ 0.32
DSC1Q08554 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DSC1Q08554 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.05■□□□□ 0.32
DSC1Q08554 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.05■□□□□ 0.32
DSC1Q08554 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.05■□□□□ 0.32
DSC1Q08554 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.05■□□□□ 0.32
DSC1Q08554 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
DSC1Q08554 AL450472.2-201ENST00000603663 1156 ntBASIC17.05■□□□□ 0.32
DSC1Q08554 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.05■□□□□ 0.32
DSC1Q08554 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
DSC1Q08554 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DSC1Q08554 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DSC1Q08554 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
DSC1Q08554 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DSC1Q08554 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DSC1Q08554 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DSC1Q08554 AC006449.6-201ENST00000612330 2296 ntBASIC17.05■□□□□ 0.32
DSC1Q08554 AD000864.1-201ENST00000624076 2295 ntBASIC17.05■□□□□ 0.32
DSC1Q08554 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DSC1Q08554 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DSC1Q08554 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.05■□□□□ 0.32
DSC1Q08554 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
DSC1Q08554 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.05■□□□□ 0.32
DSC1Q08554 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DSC1Q08554 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.05■□□□□ 0.32
DSC1Q08554 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
DSC1Q08554 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.04■□□□□ 0.32
DSC1Q08554 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DSC1Q08554 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
DSC1Q08554 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
DSC1Q08554 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
DSC1Q08554 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
DSC1Q08554 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
DSC1Q08554 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.04■□□□□ 0.32
DSC1Q08554 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DSC1Q08554 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DSC1Q08554 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.04■□□□□ 0.32
DSC1Q08554 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.04■□□□□ 0.32
DSC1Q08554 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DSC1Q08554 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DSC1Q08554 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DSC1Q08554 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.04■□□□□ 0.32
DSC1Q08554 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.04■□□□□ 0.32
DSC1Q08554 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
DSC1Q08554 SLED1-202ENST00000512051 380 ntBASIC17.04■□□□□ 0.32
DSC1Q08554 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.04■□□□□ 0.32
DSC1Q08554 BRI3BPP1-201ENST00000594224 787 ntBASIC17.04■□□□□ 0.32
DSC1Q08554 AC097359.3-201ENST00000603982 1210 ntBASIC17.04■□□□□ 0.32
DSC1Q08554 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
DSC1Q08554 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.04■□□□□ 0.32
DSC1Q08554 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DSC1Q08554 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DSC1Q08554 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
DSC1Q08554 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms