Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LTBQ06643 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.83□□□□□ -0.03
LTBQ06643 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
LTBQ06643 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
LTBQ06643 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LTBQ06643 AL592424.1-201ENST00000563624 1536 ntBASIC14.83□□□□□ -0.04
LTBQ06643 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LTBQ06643 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LTBQ06643 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
LTBQ06643 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.83□□□□□ -0.04
LTBQ06643 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.83□□□□□ -0.04
LTBQ06643 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LTBQ06643 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LTBQ06643 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LTBQ06643 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.83□□□□□ -0.04
LTBQ06643 GK-202ENST00000378941 458 ntTSL 3 BASIC14.83□□□□□ -0.04
LTBQ06643 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.83□□□□□ -0.04
LTBQ06643 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.83□□□□□ -0.04
LTBQ06643 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.83□□□□□ -0.04
LTBQ06643 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.83□□□□□ -0.04
LTBQ06643 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.83□□□□□ -0.04
LTBQ06643 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.83□□□□□ -0.04
LTBQ06643 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.83□□□□□ -0.04
LTBQ06643 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.83□□□□□ -0.04
LTBQ06643 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.83□□□□□ -0.04
LTBQ06643 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LTBQ06643 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LTBQ06643 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LTBQ06643 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LTBQ06643 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LTBQ06643 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LTBQ06643 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LTBQ06643 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LTBQ06643 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
LTBQ06643 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.83□□□□□ -0.04
LTBQ06643 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.83□□□□□ -0.04
LTBQ06643 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LTBQ06643 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.83□□□□□ -0.04
LTBQ06643 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
LTBQ06643 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LTBQ06643 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LTBQ06643 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.83□□□□□ -0.04
LTBQ06643 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LTBQ06643 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LTBQ06643 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LTBQ06643 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.82□□□□□ -0.04
LTBQ06643 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.82□□□□□ -0.04
LTBQ06643 PAUPAR-201ENST00000630360 2965 ntBASIC14.82□□□□□ -0.04
LTBQ06643 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LTBQ06643 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
LTBQ06643 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LTBQ06643 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LTBQ06643 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LTBQ06643 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
LTBQ06643 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LTBQ06643 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LTBQ06643 AC010491.1-201ENST00000563101 2797 ntBASIC14.82□□□□□ -0.04
LTBQ06643 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LTBQ06643 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LTBQ06643 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.82□□□□□ -0.04
LTBQ06643 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
LTBQ06643 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.82□□□□□ -0.04
LTBQ06643 CEND1P1-201ENST00000451006 455 ntBASIC14.82□□□□□ -0.04
LTBQ06643 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.82□□□□□ -0.04
LTBQ06643 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.82□□□□□ -0.04
LTBQ06643 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.82□□□□□ -0.04
LTBQ06643 MIR4745-201ENST00000577608 62 ntBASIC14.82□□□□□ -0.04
LTBQ06643 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.82□□□□□ -0.04
LTBQ06643 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.82□□□□□ -0.04
LTBQ06643 LINC00554-201ENST00000564841 3011 ntBASIC14.82□□□□□ -0.04
LTBQ06643 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LTBQ06643 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LTBQ06643 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
LTBQ06643 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LTBQ06643 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LTBQ06643 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
LTBQ06643 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.82□□□□□ -0.04
LTBQ06643 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LTBQ06643 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LTBQ06643 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LTBQ06643 AC105917.1-201ENST00000506637 2539 ntBASIC14.82□□□□□ -0.04
LTBQ06643 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.82□□□□□ -0.04
LTBQ06643 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
LTBQ06643 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.81□□□□□ -0.04
LTBQ06643 AC016027.1-202ENST00000607927 1699 ntBASIC14.81□□□□□ -0.04
LTBQ06643 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LTBQ06643 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LTBQ06643 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LTBQ06643 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LTBQ06643 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LTBQ06643 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LTBQ06643 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LTBQ06643 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.81□□□□□ -0.04
LTBQ06643 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LTBQ06643 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LTBQ06643 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
LTBQ06643 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LTBQ06643 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LTBQ06643 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LTBQ06643 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms