Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.36□□□□□ -0.11
NKX6-1P78426 AL158211.3-201ENST00000607385 239 ntBASIC14.36□□□□□ -0.11
NKX6-1P78426 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NKX6-1P78426 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-1P78426 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-1P78426 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.36□□□□□ -0.11
NKX6-1P78426 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-1P78426 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
NKX6-1P78426 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-1P78426 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.36□□□□□ -0.11
NKX6-1P78426 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-1P78426 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.36□□□□□ -0.11
NKX6-1P78426 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
NKX6-1P78426 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-1P78426 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-1P78426 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-1P78426 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-1P78426 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.36□□□□□ -0.11
NKX6-1P78426 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NKX6-1P78426 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-1P78426 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-1P78426 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-1P78426 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NKX6-1P78426 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
NKX6-1P78426 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NKX6-1P78426 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-1P78426 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-1P78426 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-1P78426 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-1P78426 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-1P78426 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-1P78426 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-1P78426 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.35□□□□□ -0.11
NKX6-1P78426 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-1P78426 WASH6P-202ENST00000359512 1437 ntBASIC14.35□□□□□ -0.11
NKX6-1P78426 KRT8P39-201ENST00000396270 1433 ntBASIC14.35□□□□□ -0.11
NKX6-1P78426 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-1P78426 AL671710.1-201ENST00000610245 2349 ntBASIC14.35□□□□□ -0.11
NKX6-1P78426 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-1P78426 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
NKX6-1P78426 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
NKX6-1P78426 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NKX6-1P78426 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-1P78426 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-1P78426 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-1P78426 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.35□□□□□ -0.11
NKX6-1P78426 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-1P78426 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.35□□□□□ -0.11
NKX6-1P78426 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.35□□□□□ -0.11
NKX6-1P78426 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.35□□□□□ -0.11
NKX6-1P78426 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.35□□□□□ -0.11
NKX6-1P78426 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.35□□□□□ -0.11
NKX6-1P78426 AP005018.1-201ENST00000525475 301 ntBASIC14.35□□□□□ -0.11
NKX6-1P78426 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.35□□□□□ -0.11
NKX6-1P78426 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.35□□□□□ -0.11
NKX6-1P78426 KRT8P23-201ENST00000560090 1207 ntBASIC14.35□□□□□ -0.11
NKX6-1P78426 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-1P78426 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.35□□□□□ -0.11
NKX6-1P78426 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-1P78426 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.35□□□□□ -0.11
NKX6-1P78426 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NKX6-1P78426 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-1P78426 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-1P78426 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-1P78426 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NKX6-1P78426 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.35□□□□□ -0.11
NKX6-1P78426 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NKX6-1P78426 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-1P78426 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NKX6-1P78426 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-1P78426 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
NKX6-1P78426 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-1P78426 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.35□□□□□ -0.11
NKX6-1P78426 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.35□□□□□ -0.11
NKX6-1P78426 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.35□□□□□ -0.11
NKX6-1P78426 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-1P78426 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-1P78426 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-1P78426 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NKX6-1P78426 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NKX6-1P78426 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
NKX6-1P78426 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NKX6-1P78426 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-1P78426 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-1P78426 AC105020.1-201ENST00000435356 2205 ntBASIC14.34□□□□□ -0.11
NKX6-1P78426 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-1P78426 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-1P78426 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-1P78426 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-1P78426 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-1P78426 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
NKX6-1P78426 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.34□□□□□ -0.11
NKX6-1P78426 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.34□□□□□ -0.11
NKX6-1P78426 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-1P78426 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-1P78426 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-1P78426 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-1P78426 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-1P78426 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-1P78426 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms