Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.81□□□□□ -0.04
CXCR4P61073 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CXCR4P61073 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.81□□□□□ -0.04
CXCR4P61073 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CXCR4P61073 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
CXCR4P61073 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CXCR4P61073 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CXCR4P61073 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CXCR4P61073 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.8□□□□□ -0.04
CXCR4P61073 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.8□□□□□ -0.04
CXCR4P61073 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.8□□□□□ -0.04
CXCR4P61073 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CXCR4P61073 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CXCR4P61073 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CXCR4P61073 FLJ16779-201ENST00000612722 7638 ntBASIC14.8□□□□□ -0.04
CXCR4P61073 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.8□□□□□ -0.04
CXCR4P61073 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CXCR4P61073 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CXCR4P61073 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CXCR4P61073 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CXCR4P61073 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CXCR4P61073 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.8□□□□□ -0.04
CXCR4P61073 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CXCR4P61073 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.8□□□□□ -0.04
CXCR4P61073 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CXCR4P61073 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.8□□□□□ -0.04
CXCR4P61073 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CXCR4P61073 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CXCR4P61073 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CXCR4P61073 NKAPP1-205ENST00000585790 367 ntBASIC14.8□□□□□ -0.04
CXCR4P61073 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CXCR4P61073 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.8□□□□□ -0.04
CXCR4P61073 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CXCR4P61073 AP001350.2-201ENST00000625104 1094 ntBASIC14.8□□□□□ -0.04
CXCR4P61073 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CXCR4P61073 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
CXCR4P61073 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CXCR4P61073 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.8□□□□□ -0.04
CXCR4P61073 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.8□□□□□ -0.04
CXCR4P61073 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CXCR4P61073 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.8□□□□□ -0.04
CXCR4P61073 SLC22A20-204ENST00000530038 1673 ntBASIC14.8□□□□□ -0.04
CXCR4P61073 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CXCR4P61073 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
CXCR4P61073 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CXCR4P61073 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CXCR4P61073 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CXCR4P61073 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CXCR4P61073 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
CXCR4P61073 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CXCR4P61073 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CXCR4P61073 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.79□□□□□ -0.04
CXCR4P61073 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CXCR4P61073 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CXCR4P61073 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CXCR4P61073 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CXCR4P61073 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CXCR4P61073 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CXCR4P61073 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CXCR4P61073 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CXCR4P61073 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CXCR4P61073 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CXCR4P61073 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CXCR4P61073 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CXCR4P61073 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CXCR4P61073 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CXCR4P61073 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.79□□□□□ -0.04
CXCR4P61073 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CXCR4P61073 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.79□□□□□ -0.04
CXCR4P61073 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CXCR4P61073 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.79□□□□□ -0.04
CXCR4P61073 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.79□□□□□ -0.04
CXCR4P61073 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.79□□□□□ -0.04
CXCR4P61073 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CXCR4P61073 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CXCR4P61073 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CXCR4P61073 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.79□□□□□ -0.04
CXCR4P61073 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CXCR4P61073 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
CXCR4P61073 AC106795.1-205ENST00000512851 1056 ntBASIC14.79□□□□□ -0.04
CXCR4P61073 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CXCR4P61073 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CXCR4P61073 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.79□□□□□ -0.04
CXCR4P61073 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.79□□□□□ -0.04
CXCR4P61073 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.79□□□□□ -0.04
CXCR4P61073 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
CXCR4P61073 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CXCR4P61073 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.79□□□□□ -0.04
CXCR4P61073 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.79□□□□□ -0.04
CXCR4P61073 AL589182.2-201ENST00000619332 1049 ntBASIC14.79□□□□□ -0.04
CXCR4P61073 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CXCR4P61073 AL139288.1-201ENST00000623748 933 ntBASIC14.79□□□□□ -0.04
CXCR4P61073 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.79□□□□□ -0.04
CXCR4P61073 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.79□□□□□ -0.04
CXCR4P61073 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.79□□□□□ -0.04
CXCR4P61073 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CXCR4P61073 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CXCR4P61073 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CXCR4P61073 AP003680.1-201ENST00000598970 3660 ntBASIC14.79□□□□□ -0.04
CXCR4P61073 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms