Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SPCS3P61009 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.28□□□□□ -0.28
SPCS3P61009 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SPCS3P61009 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SPCS3P61009 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SPCS3P61009 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.28□□□□□ -0.28
SPCS3P61009 SLC22A20-204ENST00000530038 1673 ntBASIC13.28□□□□□ -0.28
SPCS3P61009 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.28□□□□□ -0.28
SPCS3P61009 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SPCS3P61009 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SPCS3P61009 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SPCS3P61009 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.28□□□□□ -0.28
SPCS3P61009 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SPCS3P61009 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.28□□□□□ -0.28
SPCS3P61009 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SPCS3P61009 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SPCS3P61009 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SPCS3P61009 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
SPCS3P61009 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.28□□□□□ -0.28
SPCS3P61009 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SPCS3P61009 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SPCS3P61009 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SPCS3P61009 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SPCS3P61009 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SPCS3P61009 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SPCS3P61009 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.28□□□□□ -0.28
SPCS3P61009 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SPCS3P61009 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC13.28□□□□□ -0.28
SPCS3P61009 HCG4-201ENST00000418983 998 ntBASIC13.28□□□□□ -0.28
SPCS3P61009 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.28□□□□□ -0.28
SPCS3P61009 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.28□□□□□ -0.28
SPCS3P61009 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.28□□□□□ -0.28
SPCS3P61009 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.28□□□□□ -0.28
SPCS3P61009 AC005412.3-201ENST00000580309 715 ntBASIC13.28□□□□□ -0.28
SPCS3P61009 MTDHP3-201ENST00000594186 672 ntBASIC13.28□□□□□ -0.28
SPCS3P61009 AC092119.3-201ENST00000612618 583 ntBASIC13.28□□□□□ -0.28
SPCS3P61009 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.28□□□□□ -0.28
SPCS3P61009 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.28□□□□□ -0.28
SPCS3P61009 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SPCS3P61009 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.28□□□□□ -0.28
SPCS3P61009 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SPCS3P61009 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SPCS3P61009 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SPCS3P61009 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.28□□□□□ -0.28
SPCS3P61009 CICP20-201ENST00000443330 2801 ntBASIC13.28□□□□□ -0.28
SPCS3P61009 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SPCS3P61009 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SPCS3P61009 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SPCS3P61009 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.28□□□□□ -0.28
SPCS3P61009 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.28□□□□□ -0.28
SPCS3P61009 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SPCS3P61009 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
SPCS3P61009 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SPCS3P61009 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.28□□□□□ -0.28
SPCS3P61009 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.28□□□□□ -0.28
SPCS3P61009 AC112504.1-201ENST00000623415 1841 ntBASIC13.27□□□□□ -0.28
SPCS3P61009 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
SPCS3P61009 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.27□□□□□ -0.28
SPCS3P61009 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SPCS3P61009 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SPCS3P61009 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.27□□□□□ -0.28
SPCS3P61009 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SPCS3P61009 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SPCS3P61009 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.27□□□□□ -0.28
SPCS3P61009 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
SPCS3P61009 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SPCS3P61009 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
SPCS3P61009 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SPCS3P61009 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
SPCS3P61009 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
SPCS3P61009 KRT18P21-201ENST00000515767 1272 ntBASIC13.27□□□□□ -0.29
SPCS3P61009 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.27□□□□□ -0.29
SPCS3P61009 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.27□□□□□ -0.29
SPCS3P61009 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SPCS3P61009 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SPCS3P61009 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.27□□□□□ -0.29
SPCS3P61009 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
SPCS3P61009 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SPCS3P61009 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.27□□□□□ -0.29
SPCS3P61009 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.27□□□□□ -0.29
SPCS3P61009 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13.27□□□□□ -0.29
SPCS3P61009 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.27□□□□□ -0.29
SPCS3P61009 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.27□□□□□ -0.29
SPCS3P61009 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.27□□□□□ -0.29
SPCS3P61009 AL805961.1-202ENST00000641562 540 ntBASIC13.27□□□□□ -0.29
SPCS3P61009 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
SPCS3P61009 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC13.27□□□□□ -0.29
SPCS3P61009 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SPCS3P61009 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SPCS3P61009 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SPCS3P61009 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.27□□□□□ -0.29
SPCS3P61009 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SPCS3P61009 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SPCS3P61009 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SPCS3P61009 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SPCS3P61009 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.27□□□□□ -0.29
SPCS3P61009 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SPCS3P61009 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
SPCS3P61009 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.27□□□□□ -0.29
SPCS3P61009 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms