Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SMSP52788 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMSP52788 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMSP52788 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.26■□□□□ 0.03
SMSP52788 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMSP52788 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMSP52788 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SMSP52788 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMSP52788 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.25■□□□□ 0.03
SMSP52788 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMSP52788 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMSP52788 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMSP52788 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.25■□□□□ 0.03
SMSP52788 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.25■□□□□ 0.03
SMSP52788 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SMSP52788 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMSP52788 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SMSP52788 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
SMSP52788 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMSP52788 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMSP52788 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SMSP52788 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
SMSP52788 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SMSP52788 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.25■□□□□ 0.03
SMSP52788 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.25■□□□□ 0.03
SMSP52788 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.25■□□□□ 0.03
SMSP52788 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.25■□□□□ 0.03
SMSP52788 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.25■□□□□ 0.03
SMSP52788 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.25■□□□□ 0.03
SMSP52788 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.25■□□□□ 0.03
SMSP52788 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SMSP52788 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SMSP52788 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SMSP52788 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.25■□□□□ 0.03
SMSP52788 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SMSP52788 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMSP52788 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMSP52788 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMSP52788 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SMSP52788 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMSP52788 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SMSP52788 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMSP52788 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMSP52788 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.24■□□□□ 0.03
SMSP52788 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.24■□□□□ 0.03
SMSP52788 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMSP52788 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMSP52788 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMSP52788 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMSP52788 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.24■□□□□ 0.03
SMSP52788 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.24■□□□□ 0.03
SMSP52788 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.24■□□□□ 0.03
SMSP52788 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SMSP52788 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SMSP52788 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMSP52788 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMSP52788 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMSP52788 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMSP52788 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMSP52788 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SMSP52788 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SMSP52788 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SMSP52788 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SMSP52788 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SMSP52788 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.24■□□□□ 0.03
SMSP52788 TIMM8BP1-201ENST00000452384 211 ntBASIC15.24■□□□□ 0.03
SMSP52788 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.24■□□□□ 0.03
SMSP52788 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SMSP52788 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.24■□□□□ 0.03
SMSP52788 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMSP52788 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMSP52788 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.24■□□□□ 0.03
SMSP52788 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
SMSP52788 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SMSP52788 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SMSP52788 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SMSP52788 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.24■□□□□ 0.03
SMSP52788 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMSP52788 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SMSP52788 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.24■□□□□ 0.03
SMSP52788 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMSP52788 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMSP52788 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SMSP52788 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMSP52788 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SMSP52788 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SMSP52788 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMSP52788 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SMSP52788 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMSP52788 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SMSP52788 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.23■□□□□ 0.03
SMSP52788 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.23■□□□□ 0.03
SMSP52788 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SMSP52788 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMSP52788 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.23■□□□□ 0.03
SMSP52788 AL590787.1-201ENST00000568856 1315 ntBASIC15.23■□□□□ 0.03
SMSP52788 AC129492.6-201ENST00000611383 1305 ntBASIC15.23■□□□□ 0.03
SMSP52788 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMSP52788 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SMSP52788 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms