Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.96□□□□□ -0.01
SLC1A3P43003 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.96□□□□□ -0.01
SLC1A3P43003 KRT18P58-201ENST00000527480 1120 ntBASIC14.96□□□□□ -0.01
SLC1A3P43003 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
SLC1A3P43003 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC1A3P43003 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
SLC1A3P43003 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.96□□□□□ -0.01
SLC1A3P43003 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
SLC1A3P43003 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC1A3P43003 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SLC1A3P43003 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC1A3P43003 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SLC1A3P43003 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SLC1A3P43003 AL592424.1-201ENST00000563624 1536 ntBASIC14.96□□□□□ -0.02
SLC1A3P43003 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SLC1A3P43003 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.02
SLC1A3P43003 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.96□□□□□ -0.02
SLC1A3P43003 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SLC1A3P43003 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.96□□□□□ -0.02
SLC1A3P43003 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SLC1A3P43003 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.02
SLC1A3P43003 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SLC1A3P43003 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SLC1A3P43003 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SLC1A3P43003 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A3P43003 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
SLC1A3P43003 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
SLC1A3P43003 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A3P43003 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A3P43003 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC1A3P43003 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.95□□□□□ -0.02
SLC1A3P43003 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.95□□□□□ -0.02
SLC1A3P43003 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
SLC1A3P43003 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.95□□□□□ -0.02
SLC1A3P43003 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.95□□□□□ -0.02
SLC1A3P43003 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.95□□□□□ -0.02
SLC1A3P43003 AC040169.1-201ENST00000565382 521 ntBASIC14.95□□□□□ -0.02
SLC1A3P43003 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.95□□□□□ -0.02
SLC1A3P43003 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A3P43003 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A3P43003 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SLC1A3P43003 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A3P43003 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.95□□□□□ -0.02
SLC1A3P43003 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
SLC1A3P43003 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A3P43003 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.95□□□□□ -0.02
SLC1A3P43003 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A3P43003 AC092850.2-201ENST00000623821 2697 ntBASIC14.95□□□□□ -0.02
SLC1A3P43003 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A3P43003 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SLC1A3P43003 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC1A3P43003 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SLC1A3P43003 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A3P43003 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A3P43003 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A3P43003 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A3P43003 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A3P43003 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A3P43003 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC1A3P43003 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A3P43003 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A3P43003 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A3P43003 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A3P43003 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A3P43003 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
SLC1A3P43003 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A3P43003 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A3P43003 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.94□□□□□ -0.02
SLC1A3P43003 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.94□□□□□ -0.02
SLC1A3P43003 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A3P43003 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
SLC1A3P43003 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A3P43003 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A3P43003 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A3P43003 MIR574-201ENST00000385209 96 ntBASIC14.94□□□□□ -0.02
SLC1A3P43003 MIR940-201ENST00000401276 94 ntBASIC14.94□□□□□ -0.02
SLC1A3P43003 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SLC1A3P43003 AP000347.1-202ENST00000435868 847 ntBASIC14.94□□□□□ -0.02
SLC1A3P43003 AC093724.1-201ENST00000448659 1027 ntBASIC14.94□□□□□ -0.02
SLC1A3P43003 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.94□□□□□ -0.02
SLC1A3P43003 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.94□□□□□ -0.02
SLC1A3P43003 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A3P43003 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
SLC1A3P43003 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A3P43003 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.94□□□□□ -0.02
SLC1A3P43003 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SLC1A3P43003 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A3P43003 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
SLC1A3P43003 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A3P43003 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A3P43003 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A3P43003 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A3P43003 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A3P43003 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A3P43003 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A3P43003 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC1A3P43003 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.94□□□□□ -0.02
SLC1A3P43003 AP005117.1-202ENST00000581724 1908 ntBASIC14.94□□□□□ -0.02
SLC1A3P43003 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
SLC1A3P43003 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms