Protein–RNA interactions for Protein: P33121

ACSL1, Long-chain-fatty-acid--CoA ligase 1, humanhuman

Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACSL1P33121 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.13■□□□□ 0.17
ACSL1P33121 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ACSL1P33121 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.13■□□□□ 0.17
ACSL1P33121 AL591163.1-201ENST00000641757 987 ntBASIC16.13■□□□□ 0.17
ACSL1P33121 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ACSL1P33121 HLA-A-202ENST00000376806 1854 ntBASIC16.13■□□□□ 0.17
ACSL1P33121 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.13■□□□□ 0.17
ACSL1P33121 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ACSL1P33121 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ACSL1P33121 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.13■□□□□ 0.17
ACSL1P33121 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ACSL1P33121 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ACSL1P33121 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ACSL1P33121 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ACSL1P33121 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ACSL1P33121 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
ACSL1P33121 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ACSL1P33121 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ACSL1P33121 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ACSL1P33121 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
ACSL1P33121 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ACSL1P33121 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ACSL1P33121 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ACSL1P33121 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ACSL1P33121 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ACSL1P33121 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ACSL1P33121 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.12■□□□□ 0.17
ACSL1P33121 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ACSL1P33121 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
ACSL1P33121 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ACSL1P33121 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ACSL1P33121 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.12■□□□□ 0.17
ACSL1P33121 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ACSL1P33121 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ACSL1P33121 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.12■□□□□ 0.17
ACSL1P33121 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.12■□□□□ 0.17
ACSL1P33121 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.12■□□□□ 0.17
ACSL1P33121 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ACSL1P33121 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.12■□□□□ 0.17
ACSL1P33121 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.12■□□□□ 0.17
ACSL1P33121 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.12■□□□□ 0.17
ACSL1P33121 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ACSL1P33121 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ACSL1P33121 AL359881.2-201ENST00000602973 570 ntBASIC16.12■□□□□ 0.17
ACSL1P33121 AL365330.1-201ENST00000607459 531 ntBASIC16.12■□□□□ 0.17
ACSL1P33121 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ACSL1P33121 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ACSL1P33121 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.12■□□□□ 0.17
ACSL1P33121 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ACSL1P33121 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ACSL1P33121 CYP4F24P-201ENST00000586049 1580 ntBASIC16.12■□□□□ 0.17
ACSL1P33121 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ACSL1P33121 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ACSL1P33121 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
ACSL1P33121 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.12■□□□□ 0.17
ACSL1P33121 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ACSL1P33121 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.12■□□□□ 0.17
ACSL1P33121 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
ACSL1P33121 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.11■□□□□ 0.17
ACSL1P33121 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ACSL1P33121 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ACSL1P33121 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
ACSL1P33121 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ACSL1P33121 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
ACSL1P33121 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ACSL1P33121 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.11■□□□□ 0.17
ACSL1P33121 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.11■□□□□ 0.17
ACSL1P33121 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.11■□□□□ 0.17
ACSL1P33121 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ACSL1P33121 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
ACSL1P33121 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
ACSL1P33121 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
ACSL1P33121 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ACSL1P33121 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ACSL1P33121 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
ACSL1P33121 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ACSL1P33121 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ACSL1P33121 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.11■□□□□ 0.17
ACSL1P33121 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ACSL1P33121 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ACSL1P33121 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
ACSL1P33121 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.11■□□□□ 0.17
ACSL1P33121 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ACSL1P33121 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ACSL1P33121 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.11■□□□□ 0.17
ACSL1P33121 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.11■□□□□ 0.17
ACSL1P33121 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ACSL1P33121 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.11■□□□□ 0.17
ACSL1P33121 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.11■□□□□ 0.17
ACSL1P33121 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.11■□□□□ 0.17
ACSL1P33121 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
ACSL1P33121 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
ACSL1P33121 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.11■□□□□ 0.17
ACSL1P33121 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.11■□□□□ 0.17
ACSL1P33121 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
ACSL1P33121 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
ACSL1P33121 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ACSL1P33121 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ACSL1P33121 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ACSL1P33121 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms