Protein–RNA interactions for Protein: P32455

GBP1, Guanylate-binding protein 1, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GBP1P32455 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
GBP1P32455 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
GBP1P32455 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
GBP1P32455 AC109635.5-201ENST00000533593 962 ntBASIC17.39■□□□□ 0.37
GBP1P32455 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.39■□□□□ 0.37
GBP1P32455 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GBP1P32455 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.39■□□□□ 0.37
GBP1P32455 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.39■□□□□ 0.37
GBP1P32455 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GBP1P32455 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
GBP1P32455 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
GBP1P32455 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GBP1P32455 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
GBP1P32455 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GBP1P32455 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
GBP1P32455 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GBP1P32455 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GBP1P32455 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.39■□□□□ 0.37
GBP1P32455 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.39■□□□□ 0.37
GBP1P32455 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
GBP1P32455 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GBP1P32455 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
GBP1P32455 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.39■□□□□ 0.37
GBP1P32455 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.39■□□□□ 0.37
GBP1P32455 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
GBP1P32455 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
GBP1P32455 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GBP1P32455 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
GBP1P32455 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
GBP1P32455 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GBP1P32455 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.39■□□□□ 0.37
GBP1P32455 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
GBP1P32455 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
GBP1P32455 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
GBP1P32455 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GBP1P32455 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
GBP1P32455 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
GBP1P32455 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.38■□□□□ 0.37
GBP1P32455 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
GBP1P32455 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GBP1P32455 SNX33P1-201ENST00000592116 1762 ntBASIC17.38■□□□□ 0.37
GBP1P32455 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
GBP1P32455 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
GBP1P32455 AC104640.1-201ENST00000562617 2109 ntBASIC17.38■□□□□ 0.37
GBP1P32455 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
GBP1P32455 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
GBP1P32455 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
GBP1P32455 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
GBP1P32455 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
GBP1P32455 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
GBP1P32455 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GBP1P32455 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
GBP1P32455 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GBP1P32455 AL139400.1-201ENST00000366220 510 ntBASIC17.38■□□□□ 0.37
GBP1P32455 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
GBP1P32455 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GBP1P32455 AC092474.2-201ENST00000424288 719 ntBASIC17.38■□□□□ 0.37
GBP1P32455 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GBP1P32455 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.38■□□□□ 0.37
GBP1P32455 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.38■□□□□ 0.37
GBP1P32455 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GBP1P32455 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.38■□□□□ 0.37
GBP1P32455 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
GBP1P32455 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.38■□□□□ 0.37
GBP1P32455 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.38■□□□□ 0.37
GBP1P32455 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.38■□□□□ 0.37
GBP1P32455 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.38■□□□□ 0.37
GBP1P32455 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GBP1P32455 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GBP1P32455 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
GBP1P32455 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
GBP1P32455 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.38■□□□□ 0.37
GBP1P32455 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
GBP1P32455 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.38■□□□□ 0.37
GBP1P32455 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GBP1P32455 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
GBP1P32455 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.38■□□□□ 0.37
GBP1P32455 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
GBP1P32455 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
GBP1P32455 AL671710.1-201ENST00000610245 2349 ntBASIC17.38■□□□□ 0.37
GBP1P32455 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
GBP1P32455 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
GBP1P32455 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.38■□□□□ 0.37
GBP1P32455 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
GBP1P32455 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.38■□□□□ 0.37
GBP1P32455 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
GBP1P32455 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.38■□□□□ 0.37
GBP1P32455 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
GBP1P32455 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GBP1P32455 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GBP1P32455 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
GBP1P32455 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
GBP1P32455 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.37■□□□□ 0.37
GBP1P32455 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.37■□□□□ 0.37
GBP1P32455 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GBP1P32455 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
GBP1P32455 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GBP1P32455 AC092919.2-201ENST00000623631 1645 ntBASIC17.37■□□□□ 0.37
GBP1P32455 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
GBP1P32455 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms