Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC8P31273 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.43■□□□□ 0.38
HOXC8P31273 AC006449.6-201ENST00000612330 2296 ntBASIC17.43■□□□□ 0.38
HOXC8P31273 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC8P31273 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC8P31273 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
HOXC8P31273 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HOXC8P31273 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
HOXC8P31273 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC8P31273 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC8P31273 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC8P31273 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC8P31273 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.43■□□□□ 0.38
HOXC8P31273 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC8P31273 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HOXC8P31273 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
HOXC8P31273 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC8P31273 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC8P31273 REXO1L6P-201ENST00000603433 1515 ntBASIC17.42■□□□□ 0.38
HOXC8P31273 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.42■□□□□ 0.38
HOXC8P31273 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.42■□□□□ 0.38
HOXC8P31273 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC8P31273 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC8P31273 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC8P31273 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
HOXC8P31273 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC8P31273 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.42■□□□□ 0.38
HOXC8P31273 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC8P31273 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC8P31273 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HOXC8P31273 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.42■□□□□ 0.38
HOXC8P31273 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.42■□□□□ 0.38
HOXC8P31273 C1QBPP1-201ENST00000400117 770 ntBASIC17.42■□□□□ 0.38
HOXC8P31273 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.42■□□□□ 0.38
HOXC8P31273 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.42■□□□□ 0.38
HOXC8P31273 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.42■□□□□ 0.38
HOXC8P31273 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.42■□□□□ 0.38
HOXC8P31273 CTBP2P5-201ENST00000454986 1264 ntBASIC17.42■□□□□ 0.38
HOXC8P31273 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC8P31273 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
HOXC8P31273 KRT18P43-201ENST00000469825 1281 ntBASIC17.42■□□□□ 0.38
HOXC8P31273 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.42■□□□□ 0.38
HOXC8P31273 PTP4A1P2-201ENST00000546033 454 ntBASIC17.42■□□□□ 0.38
HOXC8P31273 AL583810.1-201ENST00000553344 1045 ntBASIC17.42■□□□□ 0.38
HOXC8P31273 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.42■□□□□ 0.38
HOXC8P31273 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.42■□□□□ 0.38
HOXC8P31273 AC005252.2-201ENST00000624630 1141 ntBASIC17.42■□□□□ 0.38
HOXC8P31273 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC8P31273 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC8P31273 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.42■□□□□ 0.38
HOXC8P31273 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.42■□□□□ 0.38
HOXC8P31273 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.42■□□□□ 0.38
HOXC8P31273 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.42■□□□□ 0.38
HOXC8P31273 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
HOXC8P31273 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC8P31273 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC8P31273 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HOXC8P31273 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC8P31273 AC012313.1-201ENST00000593393 3059 ntBASIC17.41■□□□□ 0.38
HOXC8P31273 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HOXC8P31273 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC8P31273 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC8P31273 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.41■□□□□ 0.38
HOXC8P31273 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.41■□□□□ 0.38
HOXC8P31273 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
HOXC8P31273 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
HOXC8P31273 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC8P31273 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC8P31273 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC8P31273 MIR648-201ENST00000385046 94 ntBASIC17.41■□□□□ 0.38
HOXC8P31273 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC8P31273 AC099336.1-201ENST00000417053 1171 ntBASIC17.41■□□□□ 0.38
HOXC8P31273 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.41■□□□□ 0.38
HOXC8P31273 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.41■□□□□ 0.38
HOXC8P31273 KLF2P4-201ENST00000451959 1225 ntBASIC17.41■□□□□ 0.38
HOXC8P31273 FO681548.1-201ENST00000455617 1132 ntBASIC17.41■□□□□ 0.38
HOXC8P31273 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC8P31273 AC026410.3-201ENST00000514280 936 ntBASIC17.41■□□□□ 0.38
HOXC8P31273 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.41■□□□□ 0.38
HOXC8P31273 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.41■□□□□ 0.38
HOXC8P31273 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC8P31273 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.41■□□□□ 0.38
HOXC8P31273 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.41■□□□□ 0.38
HOXC8P31273 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC8P31273 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.41■□□□□ 0.38
HOXC8P31273 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC8P31273 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HOXC8P31273 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.41■□□□□ 0.38
HOXC8P31273 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
HOXC8P31273 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC8P31273 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC8P31273 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC8P31273 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC8P31273 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC8P31273 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC8P31273 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC8P31273 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC8P31273 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
HOXC8P31273 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HOXC8P31273 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms