Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SHC1P29353 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHC1P29353 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SHC1P29353 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SHC1P29353 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHC1P29353 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SHC1P29353 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SHC1P29353 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SHC1P29353 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SHC1P29353 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHC1P29353 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHC1P29353 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHC1P29353 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SHC1P29353 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHC1P29353 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHC1P29353 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHC1P29353 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHC1P29353 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHC1P29353 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
SHC1P29353 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHC1P29353 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.9□□□□□ -0.02
SHC1P29353 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHC1P29353 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHC1P29353 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHC1P29353 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SHC1P29353 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.9□□□□□ -0.02
SHC1P29353 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SHC1P29353 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHC1P29353 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SHC1P29353 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHC1P29353 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
SHC1P29353 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.9□□□□□ -0.02
SHC1P29353 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
SHC1P29353 TIMM8BP1-201ENST00000452384 211 ntBASIC14.9□□□□□ -0.02
SHC1P29353 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SHC1P29353 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SHC1P29353 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SHC1P29353 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.9□□□□□ -0.02
SHC1P29353 AC134684.3-201ENST00000641758 218 ntBASIC14.9□□□□□ -0.02
SHC1P29353 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SHC1P29353 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SHC1P29353 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.9□□□□□ -0.02
SHC1P29353 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.9□□□□□ -0.02
SHC1P29353 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SHC1P29353 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SHC1P29353 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHC1P29353 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.9□□□□□ -0.02
SHC1P29353 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.9□□□□□ -0.02
SHC1P29353 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
SHC1P29353 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.9□□□□□ -0.02
SHC1P29353 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SHC1P29353 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHC1P29353 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHC1P29353 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.89□□□□□ -0.03
SHC1P29353 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.89□□□□□ -0.03
SHC1P29353 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SHC1P29353 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHC1P29353 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SHC1P29353 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHC1P29353 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SHC1P29353 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHC1P29353 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SHC1P29353 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.89□□□□□ -0.03
SHC1P29353 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
SHC1P29353 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SHC1P29353 AC211486.1-202ENST00000416371 468 ntBASIC14.89□□□□□ -0.03
SHC1P29353 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.89□□□□□ -0.03
SHC1P29353 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SHC1P29353 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.89□□□□□ -0.03
SHC1P29353 ACTG1P14-201ENST00000446382 1122 ntBASIC14.89□□□□□ -0.03
SHC1P29353 AC211476.1-201ENST00000503899 468 ntBASIC14.89□□□□□ -0.03
SHC1P29353 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.89□□□□□ -0.03
SHC1P29353 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
SHC1P29353 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.89□□□□□ -0.03
SHC1P29353 AC243562.1-201ENST00000560672 389 ntBASIC14.89□□□□□ -0.03
SHC1P29353 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.89□□□□□ -0.03
SHC1P29353 AL138918.1-201ENST00000568306 659 ntBASIC14.89□□□□□ -0.03
SHC1P29353 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.89□□□□□ -0.03
SHC1P29353 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHC1P29353 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.89□□□□□ -0.03
SHC1P29353 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.89□□□□□ -0.03
SHC1P29353 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.89□□□□□ -0.03
SHC1P29353 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHC1P29353 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SHC1P29353 AC139530.3-201ENST00000620344 690 ntBASIC14.89□□□□□ -0.03
SHC1P29353 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
SHC1P29353 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SHC1P29353 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHC1P29353 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHC1P29353 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SHC1P29353 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHC1P29353 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHC1P29353 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SHC1P29353 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SHC1P29353 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHC1P29353 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SHC1P29353 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHC1P29353 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
SHC1P29353 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SHC1P29353 PCGF3-213ENST00000620529 1899 ntBASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms