Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC025678.2-201ENST00000562061 970 ntBASIC15.96■□□□□ 0.15
CDH3P22223 AC008267.7-201ENST00000624570 1194 ntBASIC15.96■□□□□ 0.15
CDH3P22223 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.96■□□□□ 0.15
CDH3P22223 PAUPAR-201ENST00000630360 2965 ntBASIC15.96■□□□□ 0.15
CDH3P22223 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.96■□□□□ 0.15
CDH3P22223 AL139011.1-202ENST00000642063 584 ntBASIC15.96■□□□□ 0.15
CDH3P22223 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH3P22223 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH3P22223 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.96■□□□□ 0.15
CDH3P22223 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CDH3P22223 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CDH3P22223 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CDH3P22223 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.96■□□□□ 0.15
CDH3P22223 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH3P22223 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH3P22223 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH3P22223 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.96■□□□□ 0.15
CDH3P22223 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
CDH3P22223 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CDH3P22223 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CDH3P22223 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CDH3P22223 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDH3P22223 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDH3P22223 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH3P22223 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH3P22223 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH3P22223 SNX33P1-201ENST00000592116 1762 ntBASIC15.95■□□□□ 0.14
CDH3P22223 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH3P22223 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
CDH3P22223 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH3P22223 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CDH3P22223 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CDH3P22223 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH3P22223 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
CDH3P22223 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH3P22223 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH3P22223 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDH3P22223 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH3P22223 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH3P22223 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH3P22223 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.95■□□□□ 0.14
CDH3P22223 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH3P22223 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.95■□□□□ 0.14
CDH3P22223 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.95■□□□□ 0.14
CDH3P22223 HLA-J-203ENST00000494367 1087 ntBASIC15.95■□□□□ 0.14
CDH3P22223 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDH3P22223 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
CDH3P22223 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.95■□□□□ 0.14
CDH3P22223 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.95■□□□□ 0.14
CDH3P22223 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH3P22223 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH3P22223 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CDH3P22223 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CDH3P22223 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH3P22223 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH3P22223 AC104640.1-201ENST00000562617 2109 ntBASIC15.95■□□□□ 0.14
CDH3P22223 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH3P22223 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.95■□□□□ 0.14
CDH3P22223 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
CDH3P22223 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH3P22223 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH3P22223 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.95■□□□□ 0.14
CDH3P22223 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH3P22223 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.94■□□□□ 0.14
CDH3P22223 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.94■□□□□ 0.14
CDH3P22223 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.94■□□□□ 0.14
CDH3P22223 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH3P22223 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH3P22223 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
CDH3P22223 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH3P22223 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH3P22223 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH3P22223 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
CDH3P22223 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.94■□□□□ 0.14
CDH3P22223 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.94■□□□□ 0.14
CDH3P22223 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDH3P22223 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CDH3P22223 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
CDH3P22223 FAM58DP-201ENST00000428076 619 ntBASIC15.94■□□□□ 0.14
CDH3P22223 RBPMS2P1-201ENST00000437762 623 ntBASIC15.94■□□□□ 0.14
CDH3P22223 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.94■□□□□ 0.14
CDH3P22223 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.94■□□□□ 0.14
CDH3P22223 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.94■□□□□ 0.14
CDH3P22223 AC109322.1-201ENST00000524499 1264 ntBASIC15.94■□□□□ 0.14
CDH3P22223 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
CDH3P22223 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.94■□□□□ 0.14
CDH3P22223 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.94■□□□□ 0.14
CDH3P22223 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.94■□□□□ 0.14
CDH3P22223 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.94■□□□□ 0.14
CDH3P22223 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.94■□□□□ 0.14
CDH3P22223 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.94■□□□□ 0.14
CDH3P22223 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.94■□□□□ 0.14
CDH3P22223 AC106028.4-201ENST00000614509 607 ntBASIC15.94■□□□□ 0.14
CDH3P22223 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.94■□□□□ 0.14
CDH3P22223 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDH3P22223 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
CDH3P22223 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.94■□□□□ 0.14
CDH3P22223 AC006449.5-201ENST00000610658 2098 ntBASIC15.94■□□□□ 0.14
CDH3P22223 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDH3P22223 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms