Protein–RNA interactions for Protein: P20648

ATP4A, Potassium-transporting ATPase alpha chain 1, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP4AP20648 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATP4AP20648 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATP4AP20648 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.92■□□□□ 0.46
ATP4AP20648 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ATP4AP20648 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.92■□□□□ 0.46
ATP4AP20648 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
ATP4AP20648 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.92■□□□□ 0.46
ATP4AP20648 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATP4AP20648 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATP4AP20648 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
ATP4AP20648 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ATP4AP20648 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP4AP20648 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ATP4AP20648 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.91■□□□□ 0.46
ATP4AP20648 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
ATP4AP20648 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP4AP20648 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ATP4AP20648 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP4AP20648 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ATP4AP20648 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.91■□□□□ 0.46
ATP4AP20648 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.91■□□□□ 0.46
ATP4AP20648 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
ATP4AP20648 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.91■□□□□ 0.46
ATP4AP20648 SERBP1P3-201ENST00000459980 809 ntBASIC17.91■□□□□ 0.46
ATP4AP20648 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.91■□□□□ 0.46
ATP4AP20648 AC104794.3-201ENST00000566840 1248 ntBASIC17.91■□□□□ 0.46
ATP4AP20648 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.91■□□□□ 0.46
ATP4AP20648 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.91■□□□□ 0.46
ATP4AP20648 AC004461.2-201ENST00000629517 803 ntBASIC17.91■□□□□ 0.46
ATP4AP20648 AL109936.8-201ENST00000641772 604 ntBASIC17.91■□□□□ 0.46
ATP4AP20648 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP4AP20648 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
ATP4AP20648 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP4AP20648 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP4AP20648 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP4AP20648 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ATP4AP20648 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ATP4AP20648 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP4AP20648 BNIP3P1-202ENST00000550043 1585 ntBASIC17.91■□□□□ 0.46
ATP4AP20648 PCDH8P1-201ENST00000428983 2773 ntBASIC17.91■□□□□ 0.46
ATP4AP20648 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP4AP20648 AL662844.4-201ENST00000606367 2838 ntBASIC17.9■□□□□ 0.46
ATP4AP20648 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP4AP20648 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP4AP20648 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP4AP20648 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ATP4AP20648 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.9■□□□□ 0.46
ATP4AP20648 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ATP4AP20648 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP4AP20648 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
ATP4AP20648 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
ATP4AP20648 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP4AP20648 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.9■□□□□ 0.46
ATP4AP20648 AC004987.2-201ENST00000395959 1148 ntBASIC17.9■□□□□ 0.46
ATP4AP20648 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.9■□□□□ 0.46
ATP4AP20648 EEF1DP4-201ENST00000446006 880 ntBASIC17.9■□□□□ 0.46
ATP4AP20648 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.9■□□□□ 0.46
ATP4AP20648 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.9■□□□□ 0.46
ATP4AP20648 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ATP4AP20648 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP4AP20648 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ATP4AP20648 AL662799.1-202ENST00000614205 422 ntBASIC17.9■□□□□ 0.46
ATP4AP20648 MIR6069-201ENST00000620069 79 ntBASIC17.9■□□□□ 0.46
ATP4AP20648 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP4AP20648 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.9■□□□□ 0.46
ATP4AP20648 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP4AP20648 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP4AP20648 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.9■□□□□ 0.46
ATP4AP20648 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.9■□□□□ 0.46
ATP4AP20648 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP4AP20648 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
ATP4AP20648 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
ATP4AP20648 AC079328.2-201ENST00000561241 3354 ntBASIC17.9■□□□□ 0.46
ATP4AP20648 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP4AP20648 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
ATP4AP20648 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.89■□□□□ 0.46
ATP4AP20648 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.89■□□□□ 0.46
ATP4AP20648 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.89■□□□□ 0.46
ATP4AP20648 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ATP4AP20648 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATP4AP20648 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATP4AP20648 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
ATP4AP20648 FO393414.2-201ENST00000405153 598 ntBASIC17.89■□□□□ 0.45
ATP4AP20648 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.89■□□□□ 0.45
ATP4AP20648 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.89■□□□□ 0.45
ATP4AP20648 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.89■□□□□ 0.45
ATP4AP20648 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.89■□□□□ 0.45
ATP4AP20648 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.89■□□□□ 0.45
ATP4AP20648 AL589987.1-201ENST00000453380 819 ntBASIC17.89■□□□□ 0.45
ATP4AP20648 SDHAP3-202ENST00000515467 728 ntBASIC17.89■□□□□ 0.45
ATP4AP20648 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.89■□□□□ 0.45
ATP4AP20648 API5-211ENST00000534695 560 ntTSL 5 BASIC17.89■□□□□ 0.45
ATP4AP20648 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.89■□□□□ 0.45
ATP4AP20648 AC025048.3-201ENST00000590609 569 ntBASIC17.89■□□□□ 0.45
ATP4AP20648 AC004233.3-201ENST00000607794 1269 ntBASIC17.89■□□□□ 0.45
ATP4AP20648 AC005702.4-201ENST00000618393 416 ntBASIC17.89■□□□□ 0.45
ATP4AP20648 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.89■□□□□ 0.45
ATP4AP20648 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATP4AP20648 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.89■□□□□ 0.45
ATP4AP20648 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms