Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB4AP20338 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB4AP20338 AL391256.1-201ENST00000443260 1855 ntBASIC12.5□□□□□ -0.41
RAB4AP20338 BEND3P1-201ENST00000421591 1944 ntBASIC12.5□□□□□ -0.41
RAB4AP20338 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
RAB4AP20338 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
RAB4AP20338 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
RAB4AP20338 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB4AP20338 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.5□□□□□ -0.41
RAB4AP20338 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB4AP20338 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB4AP20338 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB4AP20338 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RAB4AP20338 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.5□□□□□ -0.41
RAB4AP20338 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.5□□□□□ -0.41
RAB4AP20338 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
RAB4AP20338 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB4AP20338 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB4AP20338 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB4AP20338 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB4AP20338 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB4AP20338 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.49□□□□□ -0.41
RAB4AP20338 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAB4AP20338 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB4AP20338 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB4AP20338 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
RAB4AP20338 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.49□□□□□ -0.41
RAB4AP20338 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
RAB4AP20338 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB4AP20338 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAB4AP20338 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB4AP20338 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
RAB4AP20338 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAB4AP20338 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB4AP20338 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
RAB4AP20338 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB4AP20338 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB4AP20338 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
RAB4AP20338 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
RAB4AP20338 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB4AP20338 CNP-204ENST00000472031 1019 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB4AP20338 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAB4AP20338 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC12.49□□□□□ -0.41
RAB4AP20338 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB4AP20338 PENK-204ENST00000518770 863 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB4AP20338 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC12.49□□□□□ -0.41
RAB4AP20338 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAB4AP20338 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RAB4AP20338 AC026471.5-201ENST00000615068 467 ntBASIC12.49□□□□□ -0.41
RAB4AP20338 AC004263.2-201ENST00000617183 678 ntBASIC12.49□□□□□ -0.41
RAB4AP20338 AC113410.3-201ENST00000623366 203 ntBASIC12.49□□□□□ -0.41
RAB4AP20338 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.49□□□□□ -0.41
RAB4AP20338 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB4AP20338 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB4AP20338 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB4AP20338 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB4AP20338 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.49□□□□□ -0.41
RAB4AP20338 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB4AP20338 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB4AP20338 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RAB4AP20338 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB4AP20338 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RAB4AP20338 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
RAB4AP20338 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC12.48□□□□□ -0.41
RAB4AP20338 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB4AP20338 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB4AP20338 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB4AP20338 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RAB4AP20338 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC12.48□□□□□ -0.41
RAB4AP20338 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RAB4AP20338 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB4AP20338 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB4AP20338 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RAB4AP20338 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RAB4AP20338 AC005912.2-201ENST00000619492 2400 ntBASIC12.48□□□□□ -0.41
RAB4AP20338 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB4AP20338 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
RAB4AP20338 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB4AP20338 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB4AP20338 UNC93B2-201ENST00000285383 730 ntBASIC12.48□□□□□ -0.41
RAB4AP20338 COX5BP2-201ENST00000392354 334 ntBASIC12.48□□□□□ -0.41
RAB4AP20338 RPS2P55-201ENST00000397318 883 ntBASIC12.48□□□□□ -0.41
RAB4AP20338 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RAB4AP20338 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RAB4AP20338 AC107956.1-201ENST00000494359 873 ntBASIC12.48□□□□□ -0.41
RAB4AP20338 IGHV3-52-201ENST00000519770 353 ntBASIC12.48□□□□□ -0.41
RAB4AP20338 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC12.48□□□□□ -0.41
RAB4AP20338 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RAB4AP20338 NEK4P2-201ENST00000580004 1012 ntBASIC12.48□□□□□ -0.41
RAB4AP20338 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC12.48□□□□□ -0.41
RAB4AP20338 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC12.48□□□□□ -0.41
RAB4AP20338 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC12.48□□□□□ -0.41
RAB4AP20338 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
RAB4AP20338 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
RAB4AP20338 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB4AP20338 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RAB4AP20338 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RAB4AP20338 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RAB4AP20338 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.48□□□□□ -0.41
RAB4AP20338 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms