Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NFKB1P19838 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
NFKB1P19838 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NFKB1P19838 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.5■□□□□ 0.23
NFKB1P19838 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.49■□□□□ 0.23
NFKB1P19838 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
NFKB1P19838 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.49■□□□□ 0.23
NFKB1P19838 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NFKB1P19838 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
NFKB1P19838 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.49■□□□□ 0.23
NFKB1P19838 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NFKB1P19838 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
NFKB1P19838 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
NFKB1P19838 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.49■□□□□ 0.23
NFKB1P19838 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NFKB1P19838 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NFKB1P19838 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.49■□□□□ 0.23
NFKB1P19838 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NFKB1P19838 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.49■□□□□ 0.23
NFKB1P19838 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NFKB1P19838 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.49■□□□□ 0.23
NFKB1P19838 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.49■□□□□ 0.23
NFKB1P19838 AC069335.1-201ENST00000489972 472 ntBASIC16.49■□□□□ 0.23
NFKB1P19838 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.49■□□□□ 0.23
NFKB1P19838 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
NFKB1P19838 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.49■□□□□ 0.23
NFKB1P19838 IGHV3-62-201ENST00000520057 340 ntBASIC16.49■□□□□ 0.23
NFKB1P19838 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.49■□□□□ 0.23
NFKB1P19838 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.49■□□□□ 0.23
NFKB1P19838 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.49■□□□□ 0.23
NFKB1P19838 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.49■□□□□ 0.23
NFKB1P19838 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.49■□□□□ 0.23
NFKB1P19838 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.49■□□□□ 0.23
NFKB1P19838 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.49■□□□□ 0.23
NFKB1P19838 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
NFKB1P19838 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
NFKB1P19838 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NFKB1P19838 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
NFKB1P19838 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NFKB1P19838 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NFKB1P19838 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NFKB1P19838 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NFKB1P19838 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NFKB1P19838 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NFKB1P19838 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.49■□□□□ 0.23
NFKB1P19838 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
NFKB1P19838 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NFKB1P19838 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NFKB1P19838 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
NFKB1P19838 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NFKB1P19838 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NFKB1P19838 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
NFKB1P19838 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NFKB1P19838 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
NFKB1P19838 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.48■□□□□ 0.23
NFKB1P19838 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NFKB1P19838 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.48■□□□□ 0.23
NFKB1P19838 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NFKB1P19838 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.48■□□□□ 0.23
NFKB1P19838 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
NFKB1P19838 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NFKB1P19838 MIR346-201ENST00000362234 95 ntBASIC16.48■□□□□ 0.23
NFKB1P19838 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.48■□□□□ 0.23
NFKB1P19838 BX842568.4-201ENST00000421222 227 ntBASIC16.48■□□□□ 0.23
NFKB1P19838 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.48■□□□□ 0.23
NFKB1P19838 AL592309.1-201ENST00000443127 649 ntBASIC16.48■□□□□ 0.23
NFKB1P19838 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.48■□□□□ 0.23
NFKB1P19838 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.48■□□□□ 0.23
NFKB1P19838 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.48■□□□□ 0.23
NFKB1P19838 AC061975.2-201ENST00000581722 295 ntBASIC16.48■□□□□ 0.23
NFKB1P19838 MIR4469-201ENST00000583919 79 ntBASIC16.48■□□□□ 0.23
NFKB1P19838 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.48■□□□□ 0.23
NFKB1P19838 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.48■□□□□ 0.23
NFKB1P19838 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.48■□□□□ 0.23
NFKB1P19838 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
NFKB1P19838 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NFKB1P19838 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
NFKB1P19838 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.48■□□□□ 0.23
NFKB1P19838 UXT-AS1-201ENST00000590504 1525 ntBASIC16.48■□□□□ 0.23
NFKB1P19838 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NFKB1P19838 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NFKB1P19838 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
NFKB1P19838 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NFKB1P19838 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.48■□□□□ 0.23
NFKB1P19838 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
NFKB1P19838 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.48■□□□□ 0.23
NFKB1P19838 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
NFKB1P19838 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.48■□□□□ 0.23
NFKB1P19838 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
NFKB1P19838 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.48■□□□□ 0.23
NFKB1P19838 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NFKB1P19838 AP003680.1-201ENST00000598970 3660 ntBASIC16.48■□□□□ 0.23
NFKB1P19838 PRAL-201ENST00000624952 3286 ntBASIC16.48■□□□□ 0.23
NFKB1P19838 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NFKB1P19838 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.48■□□□□ 0.23
NFKB1P19838 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NFKB1P19838 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.47■□□□□ 0.23
NFKB1P19838 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.47■□□□□ 0.23
NFKB1P19838 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
NFKB1P19838 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms