Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
KRT4P19013 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KRT4P19013 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.32■□□□□ 0.2
KRT4P19013 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT4P19013 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.32■□□□□ 0.2
KRT4P19013 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KRT4P19013 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT4P19013 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT4P19013 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.32■□□□□ 0.2
KRT4P19013 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT4P19013 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT4P19013 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT4P19013 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KRT4P19013 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KRT4P19013 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
KRT4P19013 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
KRT4P19013 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.32■□□□□ 0.2
KRT4P19013 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT4P19013 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.32■□□□□ 0.2
KRT4P19013 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KRT4P19013 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KRT4P19013 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.32■□□□□ 0.2
KRT4P19013 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.32■□□□□ 0.2
KRT4P19013 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
KRT4P19013 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT4P19013 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.32■□□□□ 0.2
KRT4P19013 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.32■□□□□ 0.2
KRT4P19013 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
KRT4P19013 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.32■□□□□ 0.2
KRT4P19013 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT4P19013 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT4P19013 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KRT4P19013 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT4P19013 AC007326.2-201ENST00000624224 7579 ntBASIC16.32■□□□□ 0.2
KRT4P19013 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT4P19013 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.31■□□□□ 0.2
KRT4P19013 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT4P19013 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.31■□□□□ 0.2
KRT4P19013 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.31■□□□□ 0.2
KRT4P19013 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT4P19013 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.31■□□□□ 0.2
KRT4P19013 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.31■□□□□ 0.2
KRT4P19013 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT4P19013 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT4P19013 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
KRT4P19013 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT4P19013 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.31■□□□□ 0.2
KRT4P19013 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.31■□□□□ 0.2
KRT4P19013 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KRT4P19013 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.31■□□□□ 0.2
KRT4P19013 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
KRT4P19013 FGFR3P6-201ENST00000457012 610 ntBASIC16.31■□□□□ 0.2
KRT4P19013 KRT18P21-201ENST00000515767 1272 ntBASIC16.31■□□□□ 0.2
KRT4P19013 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.31■□□□□ 0.2
KRT4P19013 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT4P19013 GGTLC5P-201ENST00000617623 998 ntBASIC16.31■□□□□ 0.2
KRT4P19013 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.31■□□□□ 0.2
KRT4P19013 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.31■□□□□ 0.2
KRT4P19013 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.31■□□□□ 0.2
KRT4P19013 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT4P19013 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
KRT4P19013 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.31■□□□□ 0.2
KRT4P19013 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT4P19013 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT4P19013 AC087481.3-201ENST00000602886 1894 ntBASIC16.31■□□□□ 0.2
KRT4P19013 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.31■□□□□ 0.2
KRT4P19013 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.31■□□□□ 0.2
KRT4P19013 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT4P19013 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT4P19013 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT4P19013 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT4P19013 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT4P19013 AC012569.1-201ENST00000591191 1524 ntBASIC16.3■□□□□ 0.2
KRT4P19013 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
KRT4P19013 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
KRT4P19013 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
KRT4P19013 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT4P19013 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.3■□□□□ 0.2
KRT4P19013 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.3■□□□□ 0.2
KRT4P19013 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT4P19013 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT4P19013 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT4P19013 RPS15P9-201ENST00000494093 319 ntBASIC16.3■□□□□ 0.2
KRT4P19013 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.3■□□□□ 0.2
KRT4P19013 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
KRT4P19013 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT4P19013 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
KRT4P19013 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT4P19013 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
KRT4P19013 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT4P19013 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT4P19013 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.3■□□□□ 0.2
KRT4P19013 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT4P19013 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT4P19013 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
KRT4P19013 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT4P19013 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT4P19013 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT4P19013 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT4P19013 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms