Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATF1P18846 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.28□□□□□ -0.12
ATF1P18846 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ATF1P18846 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ATF1P18846 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATF1P18846 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ATF1P18846 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
ATF1P18846 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.28□□□□□ -0.12
ATF1P18846 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATF1P18846 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
ATF1P18846 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.28□□□□□ -0.12
ATF1P18846 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
ATF1P18846 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ATF1P18846 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ATF1P18846 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.28□□□□□ -0.12
ATF1P18846 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.28□□□□□ -0.12
ATF1P18846 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.28□□□□□ -0.12
ATF1P18846 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATF1P18846 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.28□□□□□ -0.12
ATF1P18846 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.28□□□□□ -0.12
ATF1P18846 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.28□□□□□ -0.12
ATF1P18846 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ATF1P18846 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.28□□□□□ -0.12
ATF1P18846 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
ATF1P18846 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.28□□□□□ -0.12
ATF1P18846 IFNL4P1-201ENST00000607083 540 ntBASIC14.28□□□□□ -0.12
ATF1P18846 AC008667.4-201ENST00000607370 168 ntBASIC14.28□□□□□ -0.12
ATF1P18846 AC020765.3-201ENST00000613051 740 ntBASIC14.28□□□□□ -0.12
ATF1P18846 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
ATF1P18846 MIR1199-201ENST00000621445 119 ntBASIC14.28□□□□□ -0.12
ATF1P18846 AC063926.3-201ENST00000624734 5658 ntBASIC14.28□□□□□ -0.12
ATF1P18846 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
ATF1P18846 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.28□□□□□ -0.12
ATF1P18846 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATF1P18846 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATF1P18846 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ATF1P18846 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATF1P18846 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
ATF1P18846 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ATF1P18846 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.27□□□□□ -0.12
ATF1P18846 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
ATF1P18846 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.12
ATF1P18846 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ATF1P18846 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ATF1P18846 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
ATF1P18846 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ATF1P18846 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
ATF1P18846 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ATF1P18846 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
ATF1P18846 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ATF1P18846 AL592424.1-201ENST00000563624 1536 ntBASIC14.27□□□□□ -0.12
ATF1P18846 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.27□□□□□ -0.12
ATF1P18846 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
ATF1P18846 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.27□□□□□ -0.12
ATF1P18846 AC138035.3-201ENST00000622706 2791 ntBASIC14.27□□□□□ -0.12
ATF1P18846 CICP24-201ENST00000605464 2705 ntBASIC14.27□□□□□ -0.12
ATF1P18846 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATF1P18846 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ATF1P18846 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ATF1P18846 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATF1P18846 DUSP5P1-201ENST00000441325 1139 ntBASIC14.27□□□□□ -0.13
ATF1P18846 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.27□□□□□ -0.13
ATF1P18846 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.27□□□□□ -0.13
ATF1P18846 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATF1P18846 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ATF1P18846 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
ATF1P18846 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATF1P18846 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
ATF1P18846 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATF1P18846 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATF1P18846 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATF1P18846 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ATF1P18846 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ATF1P18846 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATF1P18846 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATF1P18846 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATF1P18846 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.26□□□□□ -0.13
ATF1P18846 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATF1P18846 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ATF1P18846 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
ATF1P18846 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ATF1P18846 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATF1P18846 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.26□□□□□ -0.13
ATF1P18846 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATF1P18846 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
ATF1P18846 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATF1P18846 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATF1P18846 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATF1P18846 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.26□□□□□ -0.13
ATF1P18846 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.26□□□□□ -0.13
ATF1P18846 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ATF1P18846 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATF1P18846 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATF1P18846 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ATF1P18846 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
ATF1P18846 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.26□□□□□ -0.13
ATF1P18846 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
ATF1P18846 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
ATF1P18846 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.26□□□□□ -0.13
ATF1P18846 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms