Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC12.62□□□□□ -0.39
CXCL1P09341 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CXCL1P09341 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL1P09341 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.62□□□□□ -0.39
CXCL1P09341 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC12.62□□□□□ -0.39
CXCL1P09341 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
CXCL1P09341 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL1P09341 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL1P09341 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL1P09341 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CXCL1P09341 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL1P09341 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC12.62□□□□□ -0.39
CXCL1P09341 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC12.62□□□□□ -0.39
CXCL1P09341 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL1P09341 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL1P09341 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL1P09341 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL1P09341 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL1P09341 AC027612.1-201ENST00000445234 2395 ntBASIC12.62□□□□□ -0.39
CXCL1P09341 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC12.62□□□□□ -0.39
CXCL1P09341 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CXCL1P09341 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.62□□□□□ -0.39
CXCL1P09341 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL1P09341 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL1P09341 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.62□□□□□ -0.39
CXCL1P09341 AL049757.1-201ENST00000616842 1596 ntBASIC12.62□□□□□ -0.39
CXCL1P09341 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC12.62□□□□□ -0.39
CXCL1P09341 BAALC-202ENST00000306391 243 ntTSL 5 BASIC12.62□□□□□ -0.39
CXCL1P09341 BAALC-204ENST00000330955 222 ntTSL 5 BASIC12.62□□□□□ -0.39
CXCL1P09341 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC12.62□□□□□ -0.39
CXCL1P09341 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
CXCL1P09341 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL1P09341 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL1P09341 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC12.62□□□□□ -0.39
CXCL1P09341 SPDYE15P-201ENST00000424157 909 ntBASIC12.62□□□□□ -0.39
CXCL1P09341 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC12.62□□□□□ -0.39
CXCL1P09341 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL1P09341 GXYLT1P3-201ENST00000453058 1193 ntBASIC12.62□□□□□ -0.39
CXCL1P09341 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CXCL1P09341 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC12.62□□□□□ -0.39
CXCL1P09341 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL1P09341 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
CXCL1P09341 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CXCL1P09341 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL1P09341 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.62□□□□□ -0.39
CXCL1P09341 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL1P09341 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC12.62□□□□□ -0.39
CXCL1P09341 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC12.62□□□□□ -0.39
CXCL1P09341 MBLAC2-202ENST00000514906 1936 ntBASIC12.62□□□□□ -0.39
CXCL1P09341 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL1P09341 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL1P09341 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL1P09341 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL1P09341 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL1P09341 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
CXCL1P09341 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL1P09341 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL1P09341 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CXCL1P09341 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CXCL1P09341 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.62□□□□□ -0.39
CXCL1P09341 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.62□□□□□ -0.39
CXCL1P09341 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CXCL1P09341 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL1P09341 ST20-AS1-201ENST00000560255 4223 ntBASIC12.61□□□□□ -0.39
CXCL1P09341 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.61□□□□□ -0.39
CXCL1P09341 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CXCL1P09341 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL1P09341 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL1P09341 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC12.61□□□□□ -0.39
CXCL1P09341 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL1P09341 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL1P09341 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL1P09341 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
CXCL1P09341 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL1P09341 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL1P09341 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL1P09341 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL1P09341 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL1P09341 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC12.61□□□□□ -0.39
CXCL1P09341 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL1P09341 LINC01568-207ENST00000641790 1380 ntBASIC12.61□□□□□ -0.39
CXCL1P09341 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL1P09341 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.61□□□□□ -0.39
CXCL1P09341 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CXCL1P09341 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL1P09341 FAM220CP-201ENST00000395253 831 ntBASIC12.61□□□□□ -0.39
CXCL1P09341 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CXCL1P09341 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC12.61□□□□□ -0.39
CXCL1P09341 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC12.61□□□□□ -0.39
CXCL1P09341 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CXCL1P09341 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC12.61□□□□□ -0.39
CXCL1P09341 COX11P1-201ENST00000489116 835 ntBASIC12.61□□□□□ -0.39
CXCL1P09341 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL1P09341 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC12.61□□□□□ -0.39
CXCL1P09341 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC12.61□□□□□ -0.39
CXCL1P09341 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
CXCL1P09341 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.61□□□□□ -0.39
CXCL1P09341 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL1P09341 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CXCL1P09341 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms