Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.32■□□□□ 0.2
RETP07949 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.32■□□□□ 0.2
RETP07949 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RETP07949 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.32■□□□□ 0.2
RETP07949 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RETP07949 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RETP07949 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.32■□□□□ 0.2
RETP07949 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.32■□□□□ 0.2
RETP07949 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.32■□□□□ 0.2
RETP07949 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.32■□□□□ 0.2
RETP07949 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.32■□□□□ 0.2
RETP07949 TPRX2P-201ENST00000535362 881 ntBASIC16.32■□□□□ 0.2
RETP07949 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.32■□□□□ 0.2
RETP07949 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RETP07949 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RETP07949 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.32■□□□□ 0.2
RETP07949 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RETP07949 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RETP07949 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.32■□□□□ 0.2
RETP07949 SRD5A3P1-201ENST00000603021 949 ntBASIC16.32■□□□□ 0.2
RETP07949 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RETP07949 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.32■□□□□ 0.2
RETP07949 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RETP07949 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RETP07949 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RETP07949 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RETP07949 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RETP07949 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RETP07949 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RETP07949 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
RETP07949 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RETP07949 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RETP07949 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RETP07949 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RETP07949 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RETP07949 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RETP07949 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RETP07949 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.31■□□□□ 0.2
RETP07949 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.31■□□□□ 0.2
RETP07949 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RETP07949 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RETP07949 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RETP07949 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RETP07949 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RETP07949 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RETP07949 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.31■□□□□ 0.2
RETP07949 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RETP07949 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
RETP07949 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.31■□□□□ 0.2
RETP07949 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RETP07949 BCYRN1-201ENST00000418539 200 ntBASIC16.31■□□□□ 0.2
RETP07949 TMEM14DP-201ENST00000422205 345 ntBASIC16.31■□□□□ 0.2
RETP07949 ELK1P1-201ENST00000485699 580 ntBASIC16.31■□□□□ 0.2
RETP07949 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.31■□□□□ 0.2
RETP07949 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
RETP07949 AC123567.1-201ENST00000548294 1261 ntBASIC16.31■□□□□ 0.2
RETP07949 SNX29P1-201ENST00000548357 1007 ntBASIC16.31■□□□□ 0.2
RETP07949 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.31■□□□□ 0.2
RETP07949 AL512361.1-201ENST00000554200 418 ntBASIC16.31■□□□□ 0.2
RETP07949 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.31■□□□□ 0.2
RETP07949 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RETP07949 RN7SL219P-201ENST00000582872 296 ntBASIC16.31■□□□□ 0.2
RETP07949 CTBP2P3-201ENST00000585629 1255 ntBASIC16.31■□□□□ 0.2
RETP07949 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.31■□□□□ 0.2
RETP07949 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RETP07949 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.31■□□□□ 0.2
RETP07949 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.31■□□□□ 0.2
RETP07949 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.31■□□□□ 0.2
RETP07949 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RETP07949 RNF216P1-203ENST00000404404 2427 ntBASIC16.31■□□□□ 0.2
RETP07949 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RETP07949 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RETP07949 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RETP07949 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.31■□□□□ 0.2
RETP07949 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RETP07949 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RETP07949 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RETP07949 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.31■□□□□ 0.2
RETP07949 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RETP07949 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RETP07949 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RETP07949 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RETP07949 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RETP07949 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.3■□□□□ 0.2
RETP07949 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
RETP07949 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RETP07949 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.3■□□□□ 0.2
RETP07949 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RETP07949 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RETP07949 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RETP07949 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RETP07949 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RETP07949 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RETP07949 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RETP07949 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RETP07949 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RETP07949 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RETP07949 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RETP07949 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RETP07949 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms