Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.28■□□□□ 0.04
CTSBP07858 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.28■□□□□ 0.04
CTSBP07858 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.28■□□□□ 0.04
CTSBP07858 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.28■□□□□ 0.04
CTSBP07858 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.28■□□□□ 0.04
CTSBP07858 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTSBP07858 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.28■□□□□ 0.04
CTSBP07858 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTSBP07858 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTSBP07858 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CTSBP07858 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
CTSBP07858 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CTSBP07858 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.28■□□□□ 0.04
CTSBP07858 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.28■□□□□ 0.04
CTSBP07858 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CTSBP07858 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CTSBP07858 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTSBP07858 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.28■□□□□ 0.04
CTSBP07858 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CTSBP07858 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CTSBP07858 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CTSBP07858 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CTSBP07858 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTSBP07858 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTSBP07858 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTSBP07858 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.27■□□□□ 0.04
CTSBP07858 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.27■□□□□ 0.04
CTSBP07858 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTSBP07858 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.27■□□□□ 0.04
CTSBP07858 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTSBP07858 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTSBP07858 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CTSBP07858 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.27■□□□□ 0.04
CTSBP07858 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CTSBP07858 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTSBP07858 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CTSBP07858 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTSBP07858 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTSBP07858 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CTSBP07858 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CTSBP07858 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.27■□□□□ 0.04
CTSBP07858 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.27■□□□□ 0.04
CTSBP07858 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.27■□□□□ 0.04
CTSBP07858 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CTSBP07858 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.27■□□□□ 0.04
CTSBP07858 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.27■□□□□ 0.04
CTSBP07858 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CTSBP07858 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CTSBP07858 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.27■□□□□ 0.04
CTSBP07858 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTSBP07858 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.27■□□□□ 0.03
CTSBP07858 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTSBP07858 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTSBP07858 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTSBP07858 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.27■□□□□ 0.03
CTSBP07858 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.27■□□□□ 0.03
CTSBP07858 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
CTSBP07858 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.26■□□□□ 0.03
CTSBP07858 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CTSBP07858 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTSBP07858 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTSBP07858 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTSBP07858 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTSBP07858 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTSBP07858 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CTSBP07858 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CTSBP07858 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.26■□□□□ 0.03
CTSBP07858 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTSBP07858 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.26■□□□□ 0.03
CTSBP07858 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTSBP07858 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTSBP07858 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTSBP07858 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTSBP07858 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTSBP07858 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTSBP07858 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.26■□□□□ 0.03
CTSBP07858 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.26■□□□□ 0.03
CTSBP07858 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.26■□□□□ 0.03
CTSBP07858 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.26■□□□□ 0.03
CTSBP07858 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.26■□□□□ 0.03
CTSBP07858 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.26■□□□□ 0.03
CTSBP07858 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.26■□□□□ 0.03
CTSBP07858 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.26■□□□□ 0.03
CTSBP07858 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTSBP07858 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTSBP07858 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.26■□□□□ 0.03
CTSBP07858 AC004461.2-201ENST00000629517 803 ntBASIC15.26■□□□□ 0.03
CTSBP07858 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.26■□□□□ 0.03
CTSBP07858 AC018695.7-201ENST00000624587 2492 ntBASIC15.26■□□□□ 0.03
CTSBP07858 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CTSBP07858 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
CTSBP07858 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTSBP07858 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.26■□□□□ 0.03
CTSBP07858 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTSBP07858 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTSBP07858 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTSBP07858 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTSBP07858 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.26■□□□□ 0.03
CTSBP07858 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTSBP07858 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms