Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 AL118506.1-201ENST00000601296 3082 ntBASIC13.03□□□□□ -0.32
APOC3P02656 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
APOC3P02656 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.03□□□□□ -0.32
APOC3P02656 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APOC3P02656 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
APOC3P02656 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.02□□□□□ -0.32
APOC3P02656 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC13.02□□□□□ -0.32
APOC3P02656 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.02□□□□□ -0.32
APOC3P02656 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
APOC3P02656 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
APOC3P02656 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
APOC3P02656 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.02□□□□□ -0.32
APOC3P02656 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.02□□□□□ -0.32
APOC3P02656 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
APOC3P02656 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
APOC3P02656 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
APOC3P02656 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
APOC3P02656 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
APOC3P02656 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.02□□□□□ -0.32
APOC3P02656 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.02□□□□□ -0.32
APOC3P02656 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.02□□□□□ -0.32
APOC3P02656 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
APOC3P02656 AC090616.6-203ENST00000579186 1945 ntBASIC13.02□□□□□ -0.32
APOC3P02656 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
APOC3P02656 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.02□□□□□ -0.32
APOC3P02656 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC13.02□□□□□ -0.33
APOC3P02656 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOC3P02656 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
APOC3P02656 AC019294.4-201ENST00000561777 2905 ntBASIC13.02□□□□□ -0.33
APOC3P02656 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOC3P02656 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
APOC3P02656 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC13.02□□□□□ -0.33
APOC3P02656 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC13.02□□□□□ -0.33
APOC3P02656 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC13.02□□□□□ -0.33
APOC3P02656 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC13.02□□□□□ -0.33
APOC3P02656 REXO2-208ENST00000539754 791 ntTSL 2 BASIC13.02□□□□□ -0.33
APOC3P02656 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
APOC3P02656 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC13.02□□□□□ -0.33
APOC3P02656 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOC3P02656 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOC3P02656 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOC3P02656 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
APOC3P02656 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
APOC3P02656 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
APOC3P02656 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.02□□□□□ -0.33
APOC3P02656 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC13.02□□□□□ -0.33
APOC3P02656 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
APOC3P02656 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
APOC3P02656 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOC3P02656 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOC3P02656 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.02□□□□□ -0.33
APOC3P02656 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
APOC3P02656 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOC3P02656 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.02□□□□□ -0.33
APOC3P02656 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.02□□□□□ -0.33
APOC3P02656 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOC3P02656 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.02□□□□□ -0.33
APOC3P02656 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOC3P02656 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.02□□□□□ -0.33
APOC3P02656 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
APOC3P02656 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
APOC3P02656 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOC3P02656 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC3P02656 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
APOC3P02656 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC3P02656 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC3P02656 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC3P02656 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.01□□□□□ -0.33
APOC3P02656 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC3P02656 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
APOC3P02656 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC3P02656 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC3P02656 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC13.01□□□□□ -0.33
APOC3P02656 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC3P02656 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC3P02656 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
APOC3P02656 PRKY-204ENST00000533551 1019 ntBASIC13.01□□□□□ -0.33
APOC3P02656 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOC3P02656 AC092118.2-201ENST00000613495 667 ntBASIC13.01□□□□□ -0.33
APOC3P02656 AL445675.2-201ENST00000620291 557 ntBASIC13.01□□□□□ -0.33
APOC3P02656 Six3os1_6.1-201ENST00000620790 196 ntBASIC13.01□□□□□ -0.33
APOC3P02656 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC3P02656 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOC3P02656 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
APOC3P02656 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOC3P02656 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC3P02656 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOC3P02656 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
APOC3P02656 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOC3P02656 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC13.01□□□□□ -0.33
APOC3P02656 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC3P02656 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC3P02656 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
APOC3P02656 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC3P02656 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC3P02656 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC3P02656 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOC3P02656 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
APOC3P02656 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.01□□□□□ -0.33
APOC3P02656 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms