Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.15■□□□□ 0.34
ZBED1O96006 RNA5SP410-201ENST00000516285 106 ntBASIC17.15■□□□□ 0.34
ZBED1O96006 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.15■□□□□ 0.34
ZBED1O96006 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZBED1O96006 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ZBED1O96006 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.15■□□□□ 0.34
ZBED1O96006 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ZBED1O96006 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZBED1O96006 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZBED1O96006 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.15■□□□□ 0.34
ZBED1O96006 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ZBED1O96006 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
ZBED1O96006 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZBED1O96006 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ZBED1O96006 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZBED1O96006 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.15■□□□□ 0.34
ZBED1O96006 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZBED1O96006 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZBED1O96006 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZBED1O96006 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZBED1O96006 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.15■□□□□ 0.34
ZBED1O96006 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.15■□□□□ 0.34
ZBED1O96006 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ZBED1O96006 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
ZBED1O96006 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
ZBED1O96006 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.34
ZBED1O96006 AC008741.2-201ENST00000612792 3115 ntBASIC17.14■□□□□ 0.34
ZBED1O96006 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.14■□□□□ 0.34
ZBED1O96006 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ZBED1O96006 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZBED1O96006 CICP6-201ENST00000457191 2729 ntBASIC17.14■□□□□ 0.33
ZBED1O96006 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZBED1O96006 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
ZBED1O96006 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ZBED1O96006 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZBED1O96006 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZBED1O96006 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.14■□□□□ 0.33
ZBED1O96006 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ZBED1O96006 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZBED1O96006 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.14■□□□□ 0.33
ZBED1O96006 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ZBED1O96006 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZBED1O96006 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZBED1O96006 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZBED1O96006 SPDYE7P-202ENST00000420373 878 ntBASIC17.14■□□□□ 0.33
ZBED1O96006 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.14■□□□□ 0.33
ZBED1O96006 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.14■□□□□ 0.33
ZBED1O96006 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.14■□□□□ 0.33
ZBED1O96006 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.14■□□□□ 0.33
ZBED1O96006 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.14■□□□□ 0.33
ZBED1O96006 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.14■□□□□ 0.33
ZBED1O96006 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.14■□□□□ 0.33
ZBED1O96006 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.14■□□□□ 0.33
ZBED1O96006 Z92544.3-201ENST00000624747 417 ntBASIC17.14■□□□□ 0.33
ZBED1O96006 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.14■□□□□ 0.33
ZBED1O96006 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.14■□□□□ 0.33
ZBED1O96006 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.14■□□□□ 0.33
ZBED1O96006 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZBED1O96006 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZBED1O96006 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ZBED1O96006 MTHFR-217ENST00000641820 1569 ntBASIC17.14■□□□□ 0.33
ZBED1O96006 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.14■□□□□ 0.33
ZBED1O96006 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
ZBED1O96006 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.14■□□□□ 0.33
ZBED1O96006 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
ZBED1O96006 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZBED1O96006 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ZBED1O96006 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZBED1O96006 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZBED1O96006 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ZBED1O96006 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
ZBED1O96006 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZBED1O96006 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ZBED1O96006 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.13■□□□□ 0.33
ZBED1O96006 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZBED1O96006 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
ZBED1O96006 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZBED1O96006 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.13■□□□□ 0.33
ZBED1O96006 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZBED1O96006 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ZBED1O96006 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZBED1O96006 AL592424.1-201ENST00000563624 1536 ntBASIC17.13■□□□□ 0.33
ZBED1O96006 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZBED1O96006 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZBED1O96006 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.13■□□□□ 0.33
ZBED1O96006 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZBED1O96006 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZBED1O96006 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZBED1O96006 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ZBED1O96006 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ZBED1O96006 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
ZBED1O96006 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZBED1O96006 AL645939.2-201ENST00000427340 991 ntBASIC17.13■□□□□ 0.33
ZBED1O96006 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.13■□□□□ 0.33
ZBED1O96006 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.13■□□□□ 0.33
ZBED1O96006 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.13■□□□□ 0.33
ZBED1O96006 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.13■□□□□ 0.33
ZBED1O96006 AC069262.1-201ENST00000539058 672 ntBASIC17.13■□□□□ 0.33
ZBED1O96006 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.13■□□□□ 0.33
ZBED1O96006 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms