Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.1□□□□□ -0.15
CCNKO75909 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCNKO75909 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCNKO75909 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
CCNKO75909 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCNKO75909 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.1□□□□□ -0.15
CCNKO75909 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCNKO75909 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCNKO75909 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCNKO75909 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCNKO75909 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCNKO75909 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14.1□□□□□ -0.15
CCNKO75909 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCNKO75909 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC14.1□□□□□ -0.15
CCNKO75909 MIR4651-201ENST00000582622 73 ntBASIC14.1□□□□□ -0.15
CCNKO75909 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCNKO75909 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.1□□□□□ -0.15
CCNKO75909 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC14.1□□□□□ -0.15
CCNKO75909 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CCNKO75909 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CCNKO75909 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CCNKO75909 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCNKO75909 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CCNKO75909 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CCNKO75909 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CCNKO75909 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCNKO75909 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCNKO75909 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCNKO75909 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC14.1□□□□□ -0.15
CCNKO75909 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCNKO75909 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCNKO75909 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.1□□□□□ -0.15
CCNKO75909 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCNKO75909 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.1□□□□□ -0.15
CCNKO75909 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.1□□□□□ -0.15
CCNKO75909 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCNKO75909 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
CCNKO75909 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.1□□□□□ -0.15
CCNKO75909 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCNKO75909 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCNKO75909 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.09□□□□□ -0.15
CCNKO75909 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.09□□□□□ -0.15
CCNKO75909 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.09□□□□□ -0.15
CCNKO75909 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
CCNKO75909 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCNKO75909 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CCNKO75909 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCNKO75909 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.09□□□□□ -0.15
CCNKO75909 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.09□□□□□ -0.15
CCNKO75909 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCNKO75909 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.09□□□□□ -0.15
CCNKO75909 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCNKO75909 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCNKO75909 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CCNKO75909 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CCNKO75909 ID1-201ENST00000376105 1233 ntBASIC14.09□□□□□ -0.15
CCNKO75909 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC14.09□□□□□ -0.15
CCNKO75909 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCNKO75909 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
CCNKO75909 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.09□□□□□ -0.15
CCNKO75909 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC14.09□□□□□ -0.15
CCNKO75909 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14.09□□□□□ -0.15
CCNKO75909 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CCNKO75909 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCNKO75909 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCNKO75909 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.09□□□□□ -0.15
CCNKO75909 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCNKO75909 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.09□□□□□ -0.15
CCNKO75909 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCNKO75909 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCNKO75909 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.09□□□□□ -0.15
CCNKO75909 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CCNKO75909 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCNKO75909 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.09□□□□□ -0.15
CCNKO75909 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CCNKO75909 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCNKO75909 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.09□□□□□ -0.15
CCNKO75909 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.09□□□□□ -0.15
CCNKO75909 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCNKO75909 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCNKO75909 TCAF1P1-201ENST00000414990 2232 ntBASIC14.09□□□□□ -0.15
CCNKO75909 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CCNKO75909 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
CCNKO75909 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
CCNKO75909 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCNKO75909 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
CCNKO75909 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCNKO75909 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CCNKO75909 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.08□□□□□ -0.16
CCNKO75909 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCNKO75909 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CCNKO75909 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCNKO75909 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCNKO75909 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCNKO75909 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCNKO75909 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC14.08□□□□□ -0.16
CCNKO75909 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCNKO75909 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCNKO75909 GRAMD4P1-201ENST00000435181 1110 ntBASIC14.08□□□□□ -0.16
CCNKO75909 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms