Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
UPK1BO75841 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1BO75841 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1BO75841 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1BO75841 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.15□□□□□ -0.14
UPK1BO75841 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.15□□□□□ -0.14
UPK1BO75841 AL356585.2-201ENST00000625078 2396 ntBASIC14.15□□□□□ -0.14
UPK1BO75841 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1BO75841 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
UPK1BO75841 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1BO75841 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
UPK1BO75841 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1BO75841 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1BO75841 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1BO75841 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1BO75841 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
UPK1BO75841 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC14.15□□□□□ -0.14
UPK1BO75841 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1BO75841 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.15□□□□□ -0.14
UPK1BO75841 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
UPK1BO75841 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.15□□□□□ -0.14
UPK1BO75841 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1BO75841 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.15□□□□□ -0.14
UPK1BO75841 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.15□□□□□ -0.14
UPK1BO75841 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.15□□□□□ -0.14
UPK1BO75841 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.15□□□□□ -0.14
UPK1BO75841 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1BO75841 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1BO75841 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1BO75841 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1BO75841 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.15□□□□□ -0.14
UPK1BO75841 AC027612.1-201ENST00000445234 2395 ntBASIC14.15□□□□□ -0.14
UPK1BO75841 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UPK1BO75841 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
UPK1BO75841 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.14□□□□□ -0.15
UPK1BO75841 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.14□□□□□ -0.15
UPK1BO75841 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.14□□□□□ -0.15
UPK1BO75841 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1BO75841 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1BO75841 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1BO75841 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
UPK1BO75841 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1BO75841 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1BO75841 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.14□□□□□ -0.15
UPK1BO75841 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1BO75841 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.14□□□□□ -0.15
UPK1BO75841 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1BO75841 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1BO75841 AC099521.3-201ENST00000624251 2938 ntBASIC14.14□□□□□ -0.15
UPK1BO75841 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1BO75841 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1BO75841 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1BO75841 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.14□□□□□ -0.15
UPK1BO75841 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1BO75841 KLF4P1-201ENST00000412782 1185 ntBASIC14.14□□□□□ -0.15
UPK1BO75841 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
UPK1BO75841 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.14□□□□□ -0.15
UPK1BO75841 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1BO75841 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC14.14□□□□□ -0.15
UPK1BO75841 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC14.14□□□□□ -0.15
UPK1BO75841 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC14.14□□□□□ -0.15
UPK1BO75841 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1BO75841 LINC01238-205ENST00000567549 1107 ntBASIC14.14□□□□□ -0.15
UPK1BO75841 AC022517.1-201ENST00000592429 346 ntBASIC14.14□□□□□ -0.15
UPK1BO75841 AC116562.4-202ENST00000641738 218 ntBASIC14.14□□□□□ -0.15
UPK1BO75841 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
UPK1BO75841 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1BO75841 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1BO75841 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.14□□□□□ -0.15
UPK1BO75841 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1BO75841 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.14□□□□□ -0.15
UPK1BO75841 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1BO75841 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1BO75841 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1BO75841 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1BO75841 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1BO75841 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.14□□□□□ -0.15
UPK1BO75841 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1BO75841 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1BO75841 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.14□□□□□ -0.15
UPK1BO75841 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UPK1BO75841 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
UPK1BO75841 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UPK1BO75841 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UPK1BO75841 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.13□□□□□ -0.15
UPK1BO75841 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.13□□□□□ -0.15
UPK1BO75841 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
UPK1BO75841 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
UPK1BO75841 AL353692.3-201ENST00000407031 1396 ntBASIC14.13□□□□□ -0.15
UPK1BO75841 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
UPK1BO75841 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.13□□□□□ -0.15
UPK1BO75841 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
UPK1BO75841 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
UPK1BO75841 PRR31-201ENST00000371629 978 ntTSL 2 BASIC14.13□□□□□ -0.15
UPK1BO75841 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
UPK1BO75841 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.13□□□□□ -0.15
UPK1BO75841 ACTG1P4-201ENST00000425123 1122 ntBASIC14.13□□□□□ -0.15
UPK1BO75841 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UPK1BO75841 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.13□□□□□ -0.15
UPK1BO75841 TK2-204ENST00000525974 1178 ntTSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms