Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.32■□□□□ 0.2
GPC4O75487 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GPC4O75487 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.32■□□□□ 0.2
GPC4O75487 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.32■□□□□ 0.2
GPC4O75487 AC023274.1-201ENST00000418278 595 ntBASIC16.32■□□□□ 0.2
GPC4O75487 AC092474.2-201ENST00000424288 719 ntBASIC16.32■□□□□ 0.2
GPC4O75487 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.32■□□□□ 0.2
GPC4O75487 PMS2P7-201ENST00000506558 1336 ntBASIC16.32■□□□□ 0.2
GPC4O75487 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GPC4O75487 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GPC4O75487 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
GPC4O75487 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
GPC4O75487 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GPC4O75487 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.32■□□□□ 0.2
GPC4O75487 AP002472.1-201ENST00000577490 586 ntBASIC16.32■□□□□ 0.2
GPC4O75487 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.32■□□□□ 0.2
GPC4O75487 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GPC4O75487 AC068137.2-201ENST00000605408 478 ntBASIC16.32■□□□□ 0.2
GPC4O75487 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GPC4O75487 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GPC4O75487 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
GPC4O75487 AC092919.2-201ENST00000623631 1645 ntBASIC16.32■□□□□ 0.2
GPC4O75487 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.32■□□□□ 0.2
GPC4O75487 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
GPC4O75487 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GPC4O75487 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GPC4O75487 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
GPC4O75487 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GPC4O75487 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GPC4O75487 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GPC4O75487 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GPC4O75487 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GPC4O75487 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GPC4O75487 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GPC4O75487 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GPC4O75487 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GPC4O75487 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GPC4O75487 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GPC4O75487 GPAA1P2-202ENST00000606848 1787 ntBASIC16.31■□□□□ 0.2
GPC4O75487 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.31■□□□□ 0.2
GPC4O75487 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GPC4O75487 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GPC4O75487 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.31■□□□□ 0.2
GPC4O75487 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GPC4O75487 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GPC4O75487 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
GPC4O75487 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
GPC4O75487 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.31■□□□□ 0.2
GPC4O75487 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GPC4O75487 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GPC4O75487 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GPC4O75487 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GPC4O75487 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GPC4O75487 MCCD1P2-201ENST00000423228 335 ntBASIC16.31■□□□□ 0.2
GPC4O75487 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.31■□□□□ 0.2
GPC4O75487 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.31■□□□□ 0.2
GPC4O75487 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.31■□□□□ 0.2
GPC4O75487 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
GPC4O75487 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.31■□□□□ 0.2
GPC4O75487 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.31■□□□□ 0.2
GPC4O75487 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GPC4O75487 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.31■□□□□ 0.2
GPC4O75487 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.31■□□□□ 0.2
GPC4O75487 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
GPC4O75487 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GPC4O75487 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
GPC4O75487 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
GPC4O75487 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
GPC4O75487 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GPC4O75487 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
GPC4O75487 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GPC4O75487 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.31■□□□□ 0.2
GPC4O75487 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GPC4O75487 LINC00554-201ENST00000564841 3011 ntBASIC16.31■□□□□ 0.2
GPC4O75487 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GPC4O75487 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
GPC4O75487 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
GPC4O75487 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
GPC4O75487 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GPC4O75487 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GPC4O75487 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GPC4O75487 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
GPC4O75487 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GPC4O75487 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GPC4O75487 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GPC4O75487 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.3■□□□□ 0.2
GPC4O75487 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
GPC4O75487 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GPC4O75487 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
GPC4O75487 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
GPC4O75487 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
GPC4O75487 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.3■□□□□ 0.2
GPC4O75487 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
GPC4O75487 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
GPC4O75487 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GPC4O75487 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.3■□□□□ 0.2
GPC4O75487 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.3■□□□□ 0.2
GPC4O75487 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GPC4O75487 AC004832.2-201ENST00000426397 482 ntBASIC16.3■□□□□ 0.2
GPC4O75487 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms