Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHOX2O60902 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.24■□□□□ 0.19
SHOX2O60902 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHOX2O60902 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHOX2O60902 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHOX2O60902 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.24■□□□□ 0.19
SHOX2O60902 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC16.24■□□□□ 0.19
SHOX2O60902 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHOX2O60902 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHOX2O60902 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SHOX2O60902 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHOX2O60902 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SHOX2O60902 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHOX2O60902 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.24■□□□□ 0.19
SHOX2O60902 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
SHOX2O60902 FAM8A6P-201ENST00000407496 1135 ntBASIC16.24■□□□□ 0.19
SHOX2O60902 LINC00982-205ENST00000420957 435 ntBASIC16.24■□□□□ 0.19
SHOX2O60902 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.24■□□□□ 0.19
SHOX2O60902 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.24■□□□□ 0.19
SHOX2O60902 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SHOX2O60902 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHOX2O60902 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.24■□□□□ 0.19
SHOX2O60902 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SHOX2O60902 AC131009.4-201ENST00000624048 1740 ntBASIC16.24■□□□□ 0.19
SHOX2O60902 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
SHOX2O60902 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.24■□□□□ 0.19
SHOX2O60902 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC16.24■□□□□ 0.19
SHOX2O60902 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SHOX2O60902 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SHOX2O60902 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SHOX2O60902 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SHOX2O60902 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
SHOX2O60902 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHOX2O60902 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SHOX2O60902 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC16.23■□□□□ 0.19
SHOX2O60902 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SHOX2O60902 AL590787.1-201ENST00000568856 1315 ntBASIC16.23■□□□□ 0.19
SHOX2O60902 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
SHOX2O60902 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SHOX2O60902 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
SHOX2O60902 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC16.23■□□□□ 0.19
SHOX2O60902 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SHOX2O60902 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.23■□□□□ 0.19
SHOX2O60902 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.23■□□□□ 0.19
SHOX2O60902 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
SHOX2O60902 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHOX2O60902 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHOX2O60902 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHOX2O60902 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHOX2O60902 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHOX2O60902 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHOX2O60902 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.23■□□□□ 0.19
SHOX2O60902 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHOX2O60902 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.23■□□□□ 0.19
SHOX2O60902 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHOX2O60902 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.23■□□□□ 0.19
SHOX2O60902 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.23■□□□□ 0.19
SHOX2O60902 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SHOX2O60902 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.23■□□□□ 0.19
SHOX2O60902 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SHOX2O60902 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SHOX2O60902 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHOX2O60902 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SHOX2O60902 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHOX2O60902 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHOX2O60902 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
SHOX2O60902 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.23■□□□□ 0.19
SHOX2O60902 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHOX2O60902 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHOX2O60902 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHOX2O60902 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHOX2O60902 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SHOX2O60902 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC16.23■□□□□ 0.19
SHOX2O60902 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHOX2O60902 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.23■□□□□ 0.19
SHOX2O60902 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHOX2O60902 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHOX2O60902 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SHOX2O60902 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SHOX2O60902 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.23■□□□□ 0.19
SHOX2O60902 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHOX2O60902 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SHOX2O60902 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHOX2O60902 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SHOX2O60902 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.22■□□□□ 0.19
SHOX2O60902 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHOX2O60902 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
SHOX2O60902 NORAD-201ENST00000565493 5339 ntBASIC16.22■□□□□ 0.19
SHOX2O60902 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHOX2O60902 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHOX2O60902 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SHOX2O60902 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.22■□□□□ 0.19
SHOX2O60902 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHOX2O60902 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHOX2O60902 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SHOX2O60902 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.22■□□□□ 0.19
SHOX2O60902 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SHOX2O60902 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.22■□□□□ 0.19
SHOX2O60902 YBX1P2-201ENST00000489612 999 ntBASIC16.22■□□□□ 0.19
SHOX2O60902 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms