Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
ITM2AO43736 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ITM2AO43736 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.93■□□□□ 0.14
ITM2AO43736 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
ITM2AO43736 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ITM2AO43736 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ITM2AO43736 FAM45BP-202ENST00000592932 1624 ntBASIC15.93■□□□□ 0.14
ITM2AO43736 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ITM2AO43736 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.93■□□□□ 0.14
ITM2AO43736 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ITM2AO43736 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ITM2AO43736 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
ITM2AO43736 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ITM2AO43736 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.92■□□□□ 0.14
ITM2AO43736 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
ITM2AO43736 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ITM2AO43736 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
ITM2AO43736 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
ITM2AO43736 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
ITM2AO43736 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ITM2AO43736 AC090616.6-203ENST00000579186 1945 ntBASIC15.92■□□□□ 0.14
ITM2AO43736 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ITM2AO43736 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ITM2AO43736 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ITM2AO43736 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
ITM2AO43736 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ITM2AO43736 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
ITM2AO43736 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
ITM2AO43736 AC105250.1-201ENST00000509378 2057 ntBASIC15.92■□□□□ 0.14
ITM2AO43736 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ITM2AO43736 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ITM2AO43736 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
ITM2AO43736 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
ITM2AO43736 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.92■□□□□ 0.14
ITM2AO43736 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
ITM2AO43736 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.92■□□□□ 0.14
ITM2AO43736 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.92■□□□□ 0.14
ITM2AO43736 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.92■□□□□ 0.14
ITM2AO43736 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.92■□□□□ 0.14
ITM2AO43736 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
ITM2AO43736 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ITM2AO43736 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
ITM2AO43736 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.92■□□□□ 0.14
ITM2AO43736 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ITM2AO43736 AC091951.1-201ENST00000512854 2465 ntBASIC15.92■□□□□ 0.14
ITM2AO43736 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ITM2AO43736 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
ITM2AO43736 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.92■□□□□ 0.14
ITM2AO43736 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
ITM2AO43736 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
ITM2AO43736 AC092127.1-201ENST00000567093 3455 ntBASIC15.92■□□□□ 0.14
ITM2AO43736 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ITM2AO43736 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ITM2AO43736 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.91■□□□□ 0.14
ITM2AO43736 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ITM2AO43736 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
ITM2AO43736 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ITM2AO43736 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
ITM2AO43736 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.91■□□□□ 0.14
ITM2AO43736 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.91■□□□□ 0.14
ITM2AO43736 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ITM2AO43736 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ITM2AO43736 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ITM2AO43736 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.91■□□□□ 0.14
ITM2AO43736 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.91■□□□□ 0.14
ITM2AO43736 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.91■□□□□ 0.14
ITM2AO43736 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ITM2AO43736 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ITM2AO43736 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.91■□□□□ 0.14
ITM2AO43736 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ITM2AO43736 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.91■□□□□ 0.14
ITM2AO43736 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.91■□□□□ 0.14
ITM2AO43736 AC093724.1-201ENST00000448659 1027 ntBASIC15.91■□□□□ 0.14
ITM2AO43736 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
ITM2AO43736 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.91■□□□□ 0.14
ITM2AO43736 AC091304.2-201ENST00000564639 760 ntBASIC15.91■□□□□ 0.14
ITM2AO43736 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ITM2AO43736 MIR3652-201ENST00000579335 131 ntBASIC15.91■□□□□ 0.14
ITM2AO43736 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.91■□□□□ 0.14
ITM2AO43736 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ITM2AO43736 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.91■□□□□ 0.14
ITM2AO43736 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ITM2AO43736 AL031055.1-201ENST00000606362 631 ntBASIC15.91■□□□□ 0.14
ITM2AO43736 AC021097.1-201ENST00000607902 574 ntBASIC15.91■□□□□ 0.14
ITM2AO43736 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.91■□□□□ 0.14
ITM2AO43736 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.91■□□□□ 0.14
ITM2AO43736 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ITM2AO43736 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ITM2AO43736 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
ITM2AO43736 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.91■□□□□ 0.14
ITM2AO43736 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.91■□□□□ 0.14
ITM2AO43736 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
ITM2AO43736 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.91■□□□□ 0.14
ITM2AO43736 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ITM2AO43736 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
ITM2AO43736 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ITM2AO43736 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
ITM2AO43736 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
ITM2AO43736 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ITM2AO43736 AC106881.1-201ENST00000605849 3329 ntBASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms