Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.21□□□□□ -0.45
SNAI2O43623 AC022532.1-201ENST00000624563 1728 ntBASIC12.21□□□□□ -0.45
SNAI2O43623 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SNAI2O43623 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SNAI2O43623 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SNAI2O43623 TLE1-202ENST00000376484 666 ntTSL 3 BASIC12.21□□□□□ -0.45
SNAI2O43623 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SNAI2O43623 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SNAI2O43623 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC12.21□□□□□ -0.45
SNAI2O43623 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
SNAI2O43623 AC096582.2-201ENST00000510860 516 ntBASIC12.21□□□□□ -0.45
SNAI2O43623 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC12.21□□□□□ -0.45
SNAI2O43623 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC12.21□□□□□ -0.45
SNAI2O43623 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC12.21□□□□□ -0.45
SNAI2O43623 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC12.21□□□□□ -0.45
SNAI2O43623 BNIP3P18-201ENST00000593976 575 ntBASIC12.21□□□□□ -0.45
SNAI2O43623 AL353135.1-201ENST00000606729 504 ntBASIC12.21□□□□□ -0.45
SNAI2O43623 AC010331.1-201ENST00000611423 582 ntBASIC12.21□□□□□ -0.45
SNAI2O43623 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
SNAI2O43623 AL590326.2-201ENST00000625139 305 ntBASIC12.21□□□□□ -0.45
SNAI2O43623 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC12.21□□□□□ -0.45
SNAI2O43623 AC006058.4-201ENST00000624016 1670 ntBASIC12.21□□□□□ -0.45
SNAI2O43623 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SNAI2O43623 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.45
SNAI2O43623 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SNAI2O43623 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
SNAI2O43623 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SNAI2O43623 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.21□□□□□ -0.46
SNAI2O43623 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
SNAI2O43623 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SNAI2O43623 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SNAI2O43623 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SNAI2O43623 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SNAI2O43623 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SNAI2O43623 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
SNAI2O43623 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SNAI2O43623 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SNAI2O43623 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SNAI2O43623 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SNAI2O43623 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SNAI2O43623 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
SNAI2O43623 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SNAI2O43623 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
SNAI2O43623 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SNAI2O43623 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SNAI2O43623 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
SNAI2O43623 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SNAI2O43623 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.2□□□□□ -0.46
SNAI2O43623 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
SNAI2O43623 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SNAI2O43623 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SNAI2O43623 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SNAI2O43623 SUPT20HL2-201ENST00000486479 2409 ntBASIC12.2□□□□□ -0.46
SNAI2O43623 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SNAI2O43623 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC12.2□□□□□ -0.46
SNAI2O43623 LINC01144-201ENST00000626198 1710 ntBASIC12.2□□□□□ -0.46
SNAI2O43623 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC12.2□□□□□ -0.46
SNAI2O43623 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SNAI2O43623 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SNAI2O43623 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SNAI2O43623 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SNAI2O43623 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SNAI2O43623 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SNAI2O43623 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SNAI2O43623 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
SNAI2O43623 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SNAI2O43623 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SNAI2O43623 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SNAI2O43623 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SNAI2O43623 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
SNAI2O43623 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SNAI2O43623 RCN1P2-201ENST00000398357 915 ntBASIC12.2□□□□□ -0.46
SNAI2O43623 BX276092.5-203ENST00000456199 560 ntBASIC12.2□□□□□ -0.46
SNAI2O43623 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SNAI2O43623 LTBR-211ENST00000543190 785 ntTSL 3 BASIC12.2□□□□□ -0.46
SNAI2O43623 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC12.2□□□□□ -0.46
SNAI2O43623 MIR4492-201ENST00000581627 80 ntBASIC12.2□□□□□ -0.46
SNAI2O43623 RBM42-202ENST00000586618 771 ntTSL 3 BASIC12.2□□□□□ -0.46
SNAI2O43623 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC12.2□□□□□ -0.46
SNAI2O43623 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SNAI2O43623 SIGLEC29P-201ENST00000599873 1114 ntBASIC12.2□□□□□ -0.46
SNAI2O43623 COPE-211ENST00000600932 1144 ntTSL 5 BASIC12.2□□□□□ -0.46
SNAI2O43623 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC12.2□□□□□ -0.46
SNAI2O43623 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
SNAI2O43623 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
SNAI2O43623 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC12.2□□□□□ -0.46
SNAI2O43623 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC12.2□□□□□ -0.46
SNAI2O43623 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SNAI2O43623 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
SNAI2O43623 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SNAI2O43623 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
SNAI2O43623 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.2□□□□□ -0.46
SNAI2O43623 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SNAI2O43623 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC12.2□□□□□ -0.46
SNAI2O43623 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC12.2□□□□□ -0.46
SNAI2O43623 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SNAI2O43623 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SNAI2O43623 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SNAI2O43623 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SNAI2O43623 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms