Protein–RNA interactions for Protein: O15534

PER1, Period circadian protein homolog 1, humanhuman

Predicted RBP Predictions only

Length 1,290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER1O15534 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC21.77■■□□□ 1.08
PER1O15534 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PER1O15534 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PER1O15534 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
PER1O15534 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
PER1O15534 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21.77■■□□□ 1.08
PER1O15534 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PER1O15534 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
PER1O15534 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PER1O15534 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
PER1O15534 RAC2-204ENST00000406508 893 ntTSL 5 BASIC21.77■■□□□ 1.08
PER1O15534 SYS1-203ENST00000414310 795 ntTSL 3 BASIC21.77■■□□□ 1.08
PER1O15534 RPL13P2-201ENST00000440687 659 ntBASIC21.77■■□□□ 1.08
PER1O15534 TMPRSS11CP-201ENST00000453277 683 ntBASIC21.77■■□□□ 1.08
PER1O15534 SPDYE18-201ENST00000510091 1050 ntBASIC21.77■■□□□ 1.08
PER1O15534 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC21.77■■□□□ 1.08
PER1O15534 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC21.77■■□□□ 1.08
PER1O15534 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC21.77■■□□□ 1.08
PER1O15534 NAA60-208ENST00000570819 833 ntTSL 2 BASIC21.77■■□□□ 1.08
PER1O15534 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC21.77■■□□□ 1.08
PER1O15534 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC21.77■■□□□ 1.08
PER1O15534 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PER1O15534 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC21.77■■□□□ 1.08
PER1O15534 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC21.77■■□□□ 1.08
PER1O15534 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PER1O15534 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
PER1O15534 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PER1O15534 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PER1O15534 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PER1O15534 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC21.76■■□□□ 1.07
PER1O15534 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
PER1O15534 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC21.76■■□□□ 1.07
PER1O15534 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC21.76■■□□□ 1.07
PER1O15534 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC21.76■■□□□ 1.07
PER1O15534 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC21.76■■□□□ 1.07
PER1O15534 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC21.76■■□□□ 1.07
PER1O15534 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC21.76■■□□□ 1.07
PER1O15534 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC21.76■■□□□ 1.07
PER1O15534 HLA-DQB2-231ENST00000435145 2026 ntBASIC21.76■■□□□ 1.07
PER1O15534 SERBP1P3-201ENST00000459980 809 ntBASIC21.76■■□□□ 1.07
PER1O15534 RN7SL618P-201ENST00000477850 296 ntBASIC21.76■■□□□ 1.07
PER1O15534 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC21.76■■□□□ 1.07
PER1O15534 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC21.76■■□□□ 1.07
PER1O15534 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC21.76■■□□□ 1.07
PER1O15534 AL109936.8-201ENST00000641772 604 ntBASIC21.76■■□□□ 1.07
PER1O15534 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PER1O15534 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC21.76■■□□□ 1.07
PER1O15534 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PER1O15534 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PER1O15534 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PER1O15534 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
PER1O15534 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
PER1O15534 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PER1O15534 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PER1O15534 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PER1O15534 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PER1O15534 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PER1O15534 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PER1O15534 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC21.75■■□□□ 1.07
PER1O15534 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC21.75■■□□□ 1.07
PER1O15534 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC21.75■■□□□ 1.07
PER1O15534 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PER1O15534 RAB35-202ENST00000534951 939 ntTSL 2 BASIC21.75■■□□□ 1.07
PER1O15534 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC21.75■■□□□ 1.07
PER1O15534 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC21.75■■□□□ 1.07
PER1O15534 AJ011932.1-201ENST00000621707 465 ntBASIC21.75■■□□□ 1.07
PER1O15534 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC21.75■■□□□ 1.07
PER1O15534 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PER1O15534 BTBD7P1-201ENST00000447253 1453 ntBASIC21.75■■□□□ 1.07
PER1O15534 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
PER1O15534 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PER1O15534 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
PER1O15534 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
PER1O15534 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PER1O15534 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PER1O15534 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PER1O15534 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC21.75■■□□□ 1.07
PER1O15534 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC21.74■■□□□ 1.07
PER1O15534 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
PER1O15534 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC21.74■■□□□ 1.07
PER1O15534 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC21.74■■□□□ 1.07
PER1O15534 AC008894.3-201ENST00000624324 3103 ntBASIC21.74■■□□□ 1.07
PER1O15534 AMT-233ENST00000636522 1620 ntTSL 2 BASIC21.74■■□□□ 1.07
PER1O15534 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PER1O15534 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PER1O15534 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC21.74■■□□□ 1.07
PER1O15534 KRT18P64-201ENST00000434946 1219 ntBASIC21.74■■□□□ 1.07
PER1O15534 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PER1O15534 SDHAP3-202ENST00000515467 728 ntBASIC21.74■■□□□ 1.07
PER1O15534 RNA5SP421-201ENST00000516864 134 ntBASIC21.74■■□□□ 1.07
PER1O15534 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC21.74■■□□□ 1.07
PER1O15534 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PER1O15534 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC21.74■■□□□ 1.07
PER1O15534 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC21.74■■□□□ 1.07
PER1O15534 LINC01115-203ENST00000606068 577 ntBASIC21.74■■□□□ 1.07
PER1O15534 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC21.74■■□□□ 1.07
PER1O15534 AC004461.2-201ENST00000629517 803 ntBASIC21.74■■□□□ 1.07
PER1O15534 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PER1O15534 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC21.74■■□□□ 1.07
PER1O15534 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms