Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PFDN6O15212 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PFDN6O15212 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
PFDN6O15212 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PFDN6O15212 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PFDN6O15212 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PFDN6O15212 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PFDN6O15212 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.3■□□□□ 0.2
PFDN6O15212 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.3■□□□□ 0.2
PFDN6O15212 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PFDN6O15212 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
PFDN6O15212 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PFDN6O15212 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PFDN6O15212 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PFDN6O15212 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PFDN6O15212 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.3■□□□□ 0.2
PFDN6O15212 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.3■□□□□ 0.2
PFDN6O15212 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PFDN6O15212 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PFDN6O15212 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PFDN6O15212 PMS2P7-201ENST00000506558 1336 ntBASIC16.3■□□□□ 0.2
PFDN6O15212 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PFDN6O15212 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.3■□□□□ 0.2
PFDN6O15212 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PFDN6O15212 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.3■□□□□ 0.2
PFDN6O15212 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.3■□□□□ 0.2
PFDN6O15212 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PFDN6O15212 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PFDN6O15212 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.3■□□□□ 0.2
PFDN6O15212 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.3■□□□□ 0.2
PFDN6O15212 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.3■□□□□ 0.2
PFDN6O15212 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.3■□□□□ 0.2
PFDN6O15212 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.3■□□□□ 0.2
PFDN6O15212 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PFDN6O15212 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PFDN6O15212 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PFDN6O15212 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PFDN6O15212 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PFDN6O15212 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PFDN6O15212 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PFDN6O15212 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PFDN6O15212 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
PFDN6O15212 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PFDN6O15212 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
PFDN6O15212 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PFDN6O15212 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.3■□□□□ 0.2
PFDN6O15212 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PFDN6O15212 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PFDN6O15212 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PFDN6O15212 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.3■□□□□ 0.2
PFDN6O15212 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PFDN6O15212 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PFDN6O15212 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
PFDN6O15212 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PFDN6O15212 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PFDN6O15212 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PFDN6O15212 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PFDN6O15212 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PFDN6O15212 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PFDN6O15212 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PFDN6O15212 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PFDN6O15212 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PFDN6O15212 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PFDN6O15212 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.29■□□□□ 0.2
PFDN6O15212 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PFDN6O15212 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PFDN6O15212 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
PFDN6O15212 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PFDN6O15212 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.29■□□□□ 0.2
PFDN6O15212 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
PFDN6O15212 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
PFDN6O15212 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
PFDN6O15212 SLC25A1P1-201ENST00000528351 927 ntBASIC16.29■□□□□ 0.2
PFDN6O15212 FAM86C2P-203ENST00000528684 1004 ntBASIC16.29■□□□□ 0.2
PFDN6O15212 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PFDN6O15212 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PFDN6O15212 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PFDN6O15212 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
PFDN6O15212 AC040169.1-201ENST00000565382 521 ntBASIC16.29■□□□□ 0.2
PFDN6O15212 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.29■□□□□ 0.2
PFDN6O15212 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PFDN6O15212 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.29■□□□□ 0.2
PFDN6O15212 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PFDN6O15212 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PFDN6O15212 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PFDN6O15212 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PFDN6O15212 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PFDN6O15212 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.29■□□□□ 0.2
PFDN6O15212 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.29■□□□□ 0.2
PFDN6O15212 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.29■□□□□ 0.2
PFDN6O15212 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PFDN6O15212 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PFDN6O15212 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.28■□□□□ 0.2
PFDN6O15212 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PFDN6O15212 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.28■□□□□ 0.2
PFDN6O15212 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PFDN6O15212 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PFDN6O15212 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PFDN6O15212 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PFDN6O15212 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms