Protein–RNA interactions for Protein: A4UGR9

XIRP2, Xin actin-binding repeat-containing protein 2, humanhuman

Predictions only

Length 3,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP2A4UGR9 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
XIRP2A4UGR9 AC006480.2-201ENST00000609770 1337 ntBASIC16.6■□□□□ 0.25
XIRP2A4UGR9 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
XIRP2A4UGR9 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.6■□□□□ 0.25
XIRP2A4UGR9 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
XIRP2A4UGR9 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
XIRP2A4UGR9 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
XIRP2A4UGR9 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.6■□□□□ 0.25
XIRP2A4UGR9 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.6■□□□□ 0.25
XIRP2A4UGR9 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.6■□□□□ 0.25
XIRP2A4UGR9 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.6■□□□□ 0.25
XIRP2A4UGR9 HLA-C-210ENST00000640219 976 ntBASIC16.6■□□□□ 0.25
XIRP2A4UGR9 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
XIRP2A4UGR9 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
XIRP2A4UGR9 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
XIRP2A4UGR9 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
XIRP2A4UGR9 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
XIRP2A4UGR9 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
XIRP2A4UGR9 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
XIRP2A4UGR9 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.59■□□□□ 0.25
XIRP2A4UGR9 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC16.59■□□□□ 0.25
XIRP2A4UGR9 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC16.59■□□□□ 0.25
XIRP2A4UGR9 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.59■□□□□ 0.25
XIRP2A4UGR9 AC134915.1-201ENST00000426461 574 ntBASIC16.59■□□□□ 0.25
XIRP2A4UGR9 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.59■□□□□ 0.25
XIRP2A4UGR9 C2orf27AP3-201ENST00000434123 579 ntBASIC16.59■□□□□ 0.25
XIRP2A4UGR9 SPTLC1P5-201ENST00000450718 252 ntBASIC16.59■□□□□ 0.25
XIRP2A4UGR9 AC023310.1-201ENST00000554836 735 ntBASIC16.59■□□□□ 0.25
XIRP2A4UGR9 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
XIRP2A4UGR9 AL354718.3-201ENST00000616414 581 ntBASIC16.59■□□□□ 0.25
XIRP2A4UGR9 CR382287.1-201ENST00000623954 586 ntBASIC16.59■□□□□ 0.25
XIRP2A4UGR9 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
XIRP2A4UGR9 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
XIRP2A4UGR9 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
XIRP2A4UGR9 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
XIRP2A4UGR9 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
XIRP2A4UGR9 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
XIRP2A4UGR9 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
XIRP2A4UGR9 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
XIRP2A4UGR9 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.59■□□□□ 0.25
XIRP2A4UGR9 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.59■□□□□ 0.25
XIRP2A4UGR9 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.59■□□□□ 0.25
XIRP2A4UGR9 AC015818.8-201ENST00000587907 1519 ntBASIC16.59■□□□□ 0.25
XIRP2A4UGR9 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
XIRP2A4UGR9 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
XIRP2A4UGR9 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.59■□□□□ 0.25
XIRP2A4UGR9 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
XIRP2A4UGR9 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.59■□□□□ 0.25
XIRP2A4UGR9 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
XIRP2A4UGR9 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
XIRP2A4UGR9 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
XIRP2A4UGR9 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.59■□□□□ 0.25
XIRP2A4UGR9 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.59■□□□□ 0.25
XIRP2A4UGR9 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
XIRP2A4UGR9 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
XIRP2A4UGR9 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
XIRP2A4UGR9 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
XIRP2A4UGR9 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC16.58■□□□□ 0.25
XIRP2A4UGR9 AC044849.1-201ENST00000519737 1188 ntBASIC16.58■□□□□ 0.25
XIRP2A4UGR9 AP001063.1-201ENST00000568332 529 ntBASIC16.58■□□□□ 0.25
XIRP2A4UGR9 AC025279.2-201ENST00000569730 653 ntBASIC16.58■□□□□ 0.25
XIRP2A4UGR9 MIR3907-201ENST00000579424 151 ntBASIC16.58■□□□□ 0.25
XIRP2A4UGR9 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.58■□□□□ 0.25
XIRP2A4UGR9 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
XIRP2A4UGR9 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
XIRP2A4UGR9 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.58■□□□□ 0.25
XIRP2A4UGR9 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
XIRP2A4UGR9 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.58■□□□□ 0.25
XIRP2A4UGR9 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
XIRP2A4UGR9 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.58■□□□□ 0.25
XIRP2A4UGR9 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
XIRP2A4UGR9 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
XIRP2A4UGR9 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
XIRP2A4UGR9 C1QBPP1-201ENST00000400117 770 ntBASIC16.58■□□□□ 0.24
XIRP2A4UGR9 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.58■□□□□ 0.24
XIRP2A4UGR9 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
XIRP2A4UGR9 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
XIRP2A4UGR9 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.58■□□□□ 0.24
XIRP2A4UGR9 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC16.58■□□□□ 0.24
XIRP2A4UGR9 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.58■□□□□ 0.24
XIRP2A4UGR9 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.58■□□□□ 0.24
XIRP2A4UGR9 AC120045.2-201ENST00000567334 178 ntBASIC16.58■□□□□ 0.24
XIRP2A4UGR9 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.58■□□□□ 0.24
XIRP2A4UGR9 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.58■□□□□ 0.24
XIRP2A4UGR9 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
XIRP2A4UGR9 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
XIRP2A4UGR9 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
XIRP2A4UGR9 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
XIRP2A4UGR9 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
XIRP2A4UGR9 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
XIRP2A4UGR9 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
XIRP2A4UGR9 LINC02012-201ENST00000608206 1725 ntBASIC16.58■□□□□ 0.24
XIRP2A4UGR9 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.58■□□□□ 0.24
XIRP2A4UGR9 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
XIRP2A4UGR9 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
XIRP2A4UGR9 KRT18P66-201ENST00000452970 1269 ntBASIC16.58■□□□□ 0.24
XIRP2A4UGR9 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
XIRP2A4UGR9 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.58■□□□□ 0.24
XIRP2A4UGR9 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
XIRP2A4UGR9 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms