Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RNF103-CHMP3A0A140T963 AC006058.4-201ENST00000624016 1670 ntBASIC15.71■□□□□ 0.11
RNF103-CHMP3A0A140T963 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
RNF103-CHMP3A0A140T963 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RNF103-CHMP3A0A140T963 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RNF103-CHMP3A0A140T963 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF103-CHMP3A0A140T963 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RNF103-CHMP3A0A140T963 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
RNF103-CHMP3A0A140T963 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.71■□□□□ 0.11
RNF103-CHMP3A0A140T963 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.71■□□□□ 0.11
RNF103-CHMP3A0A140T963 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.71■□□□□ 0.11
RNF103-CHMP3A0A140T963 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.71■□□□□ 0.11
RNF103-CHMP3A0A140T963 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.71■□□□□ 0.11
RNF103-CHMP3A0A140T963 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.71■□□□□ 0.11
RNF103-CHMP3A0A140T963 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.71■□□□□ 0.11
RNF103-CHMP3A0A140T963 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.71■□□□□ 0.11
RNF103-CHMP3A0A140T963 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF103-CHMP3A0A140T963 CYP2A7P1-201ENST00000595391 815 ntBASIC15.71■□□□□ 0.11
RNF103-CHMP3A0A140T963 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.71■□□□□ 0.11
RNF103-CHMP3A0A140T963 GGTLC5P-201ENST00000617623 998 ntBASIC15.71■□□□□ 0.11
RNF103-CHMP3A0A140T963 MIR1199-201ENST00000621445 119 ntBASIC15.71■□□□□ 0.11
RNF103-CHMP3A0A140T963 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.71■□□□□ 0.11
RNF103-CHMP3A0A140T963 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF103-CHMP3A0A140T963 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF103-CHMP3A0A140T963 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF103-CHMP3A0A140T963 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RNF103-CHMP3A0A140T963 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF103-CHMP3A0A140T963 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RNF103-CHMP3A0A140T963 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF103-CHMP3A0A140T963 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RNF103-CHMP3A0A140T963 AC013268.4-201ENST00000637413 2228 ntBASIC15.71■□□□□ 0.1
RNF103-CHMP3A0A140T963 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.71■□□□□ 0.1
RNF103-CHMP3A0A140T963 GGT4P-201ENST00000623672 1708 ntBASIC15.71■□□□□ 0.1
RNF103-CHMP3A0A140T963 AL353732.1-201ENST00000569618 1459 ntBASIC15.71■□□□□ 0.1
RNF103-CHMP3A0A140T963 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.71■□□□□ 0.1
RNF103-CHMP3A0A140T963 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RNF103-CHMP3A0A140T963 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 AC006449.6-201ENST00000612330 2296 ntBASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 TNRC18P2-201ENST00000417666 2714 ntBASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 AC073621.1-201ENST00000392730 636 ntBASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 UNC93B7-201ENST00000509439 705 ntBASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RNF103-CHMP3A0A140T963 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.69■□□□□ 0.1
RNF103-CHMP3A0A140T963 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms