Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPCS1Q9Y6A9 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPCS1Q9Y6A9 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SPCS1Q9Y6A9 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC16.31■□□□□ 0.2
SPCS1Q9Y6A9 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPCS1Q9Y6A9 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SPCS1Q9Y6A9 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPCS1Q9Y6A9 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC16.31■□□□□ 0.2
SPCS1Q9Y6A9 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SPCS1Q9Y6A9 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPCS1Q9Y6A9 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.3■□□□□ 0.2
SPCS1Q9Y6A9 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPCS1Q9Y6A9 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPCS1Q9Y6A9 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPCS1Q9Y6A9 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPCS1Q9Y6A9 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC16.3■□□□□ 0.2
SPCS1Q9Y6A9 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPCS1Q9Y6A9 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPCS1Q9Y6A9 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SPCS1Q9Y6A9 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPCS1Q9Y6A9 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC16.29■□□□□ 0.2
SPCS1Q9Y6A9 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPCS1Q9Y6A9 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPCS1Q9Y6A9 AC100797.4-201ENST00000631653 1827 ntBASIC16.29■□□□□ 0.2
SPCS1Q9Y6A9 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPCS1Q9Y6A9 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPCS1Q9Y6A9 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPCS1Q9Y6A9 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPCS1Q9Y6A9 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SPCS1Q9Y6A9 AC096887.2-201ENST00000623443 1957 ntBASIC16.28■□□□□ 0.2
SPCS1Q9Y6A9 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPCS1Q9Y6A9 WHAMMP2-203ENST00000563942 1603 ntBASIC16.28■□□□□ 0.2
SPCS1Q9Y6A9 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPCS1Q9Y6A9 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPCS1Q9Y6A9 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SPCS1Q9Y6A9 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SPCS1Q9Y6A9 GALC-202ENST00000393568 2054 ntTSL 2 BASIC16.27■□□□□ 0.2
SPCS1Q9Y6A9 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SPCS1Q9Y6A9 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SPCS1Q9Y6A9 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
SPCS1Q9Y6A9 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
SPCS1Q9Y6A9 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SPCS1Q9Y6A9 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC16.27■□□□□ 0.19
SPCS1Q9Y6A9 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SPCS1Q9Y6A9 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SPCS1Q9Y6A9 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SPCS1Q9Y6A9 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPCS1Q9Y6A9 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPCS1Q9Y6A9 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
SPCS1Q9Y6A9 AC092667.1-201ENST00000434301 2586 ntBASIC16.26■□□□□ 0.19
SPCS1Q9Y6A9 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SPCS1Q9Y6A9 AC233723.2-201ENST00000623798 2106 ntBASIC16.26■□□□□ 0.19
SPCS1Q9Y6A9 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
SPCS1Q9Y6A9 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SPCS1Q9Y6A9 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SPCS1Q9Y6A9 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SPCS1Q9Y6A9 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SPCS1Q9Y6A9 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC16.25■□□□□ 0.19
SPCS1Q9Y6A9 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SPCS1Q9Y6A9 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SPCS1Q9Y6A9 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SPCS1Q9Y6A9 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPCS1Q9Y6A9 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPCS1Q9Y6A9 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPCS1Q9Y6A9 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC16.24■□□□□ 0.19
SPCS1Q9Y6A9 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPCS1Q9Y6A9 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SPCS1Q9Y6A9 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPCS1Q9Y6A9 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPCS1Q9Y6A9 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SPCS1Q9Y6A9 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SPCS1Q9Y6A9 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPCS1Q9Y6A9 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SPCS1Q9Y6A9 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.23■□□□□ 0.19
SPCS1Q9Y6A9 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SPCS1Q9Y6A9 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SPCS1Q9Y6A9 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SPCS1Q9Y6A9 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SPCS1Q9Y6A9 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SPCS1Q9Y6A9 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SPCS1Q9Y6A9 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
SPCS1Q9Y6A9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SPCS1Q9Y6A9 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
SPCS1Q9Y6A9 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SPCS1Q9Y6A9 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPCS1Q9Y6A9 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPCS1Q9Y6A9 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPCS1Q9Y6A9 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPCS1Q9Y6A9 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPCS1Q9Y6A9 WWC2-AS2-201ENST00000578387 2183 ntBASIC16.22■□□□□ 0.19
SPCS1Q9Y6A9 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.22■□□□□ 0.19
SPCS1Q9Y6A9 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPCS1Q9Y6A9 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPCS1Q9Y6A9 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
SPCS1Q9Y6A9 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SPCS1Q9Y6A9 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SPCS1Q9Y6A9 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.21■□□□□ 0.19
SPCS1Q9Y6A9 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.21■□□□□ 0.19
SPCS1Q9Y6A9 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SPCS1Q9Y6A9 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms