Protein–RNA interactions for Protein: Q9Y5G6

PCDHGA7, Protocadherin gamma-A7, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA7Q9Y5G6 AC131212.1-201ENST00000613771 668 ntBASIC23.34■■□□□ 1.33
PCDHGA7Q9Y5G6 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGA7Q9Y5G6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGA7Q9Y5G6 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGA7Q9Y5G6 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHGA7Q9Y5G6 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
PCDHGA7Q9Y5G6 AL359504.2-201ENST00000605506 1601 ntBASIC23.33■■□□□ 1.33
PCDHGA7Q9Y5G6 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.33■■□□□ 1.33
PCDHGA7Q9Y5G6 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGA7Q9Y5G6 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
PCDHGA7Q9Y5G6 AC019171.1-201ENST00000601251 1056 ntBASIC23.33■■□□□ 1.33
PCDHGA7Q9Y5G6 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.33■■□□□ 1.33
PCDHGA7Q9Y5G6 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHGA7Q9Y5G6 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
PCDHGA7Q9Y5G6 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.33■■□□□ 1.32
PCDHGA7Q9Y5G6 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGA7Q9Y5G6 AC103724.3-201ENST00000564481 992 ntBASIC23.32■■□□□ 1.32
PCDHGA7Q9Y5G6 AL031848.2-201ENST00000607670 837 ntBASIC23.32■■□□□ 1.32
PCDHGA7Q9Y5G6 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGA7Q9Y5G6 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
PCDHGA7Q9Y5G6 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGA7Q9Y5G6 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHGA7Q9Y5G6 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGA7Q9Y5G6 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGA7Q9Y5G6 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
PCDHGA7Q9Y5G6 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGA7Q9Y5G6 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.31■■□□□ 1.32
PCDHGA7Q9Y5G6 THA1P-201ENST00000590384 1145 ntBASIC23.31■■□□□ 1.32
PCDHGA7Q9Y5G6 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
PCDHGA7Q9Y5G6 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHGA7Q9Y5G6 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGA7Q9Y5G6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.3■■□□□ 1.32
PCDHGA7Q9Y5G6 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGA7Q9Y5G6 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGA7Q9Y5G6 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGA7Q9Y5G6 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGA7Q9Y5G6 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGA7Q9Y5G6 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGA7Q9Y5G6 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGA7Q9Y5G6 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.3■■□□□ 1.32
PCDHGA7Q9Y5G6 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHGA7Q9Y5G6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHGA7Q9Y5G6 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.29■■□□□ 1.32
PCDHGA7Q9Y5G6 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHGA7Q9Y5G6 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
PCDHGA7Q9Y5G6 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.29■■□□□ 1.32
PCDHGA7Q9Y5G6 AC019069.1-201ENST00000610008 1333 ntBASIC23.29■■□□□ 1.32
PCDHGA7Q9Y5G6 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHGA7Q9Y5G6 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGA7Q9Y5G6 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.28■■□□□ 1.32
PCDHGA7Q9Y5G6 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGA7Q9Y5G6 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.28■■□□□ 1.32
PCDHGA7Q9Y5G6 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGA7Q9Y5G6 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHGA7Q9Y5G6 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGA7Q9Y5G6 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGA7Q9Y5G6 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGA7Q9Y5G6 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGA7Q9Y5G6 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGA7Q9Y5G6 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.27■■□□□ 1.32
PCDHGA7Q9Y5G6 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
PCDHGA7Q9Y5G6 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.27■■□□□ 1.32
PCDHGA7Q9Y5G6 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHGA7Q9Y5G6 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.26■■□□□ 1.31
PCDHGA7Q9Y5G6 AC138932.3-201ENST00000567634 1902 ntBASIC23.26■■□□□ 1.31
PCDHGA7Q9Y5G6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDHGA7Q9Y5G6 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGA7Q9Y5G6 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDHGA7Q9Y5G6 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDHGA7Q9Y5G6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGA7Q9Y5G6 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
PCDHGA7Q9Y5G6 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHGA7Q9Y5G6 AL139125.2-201ENST00000623134 1869 ntBASIC23.26■■□□□ 1.31
PCDHGA7Q9Y5G6 AC022211.4-201ENST00000625094 2161 ntBASIC23.25■■□□□ 1.31
PCDHGA7Q9Y5G6 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGA7Q9Y5G6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGA7Q9Y5G6 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGA7Q9Y5G6 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGA7Q9Y5G6 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGA7Q9Y5G6 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGA7Q9Y5G6 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHGA7Q9Y5G6 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.25■■□□□ 1.31
PCDHGA7Q9Y5G6 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.24■■□□□ 1.31
PCDHGA7Q9Y5G6 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.24■■□□□ 1.31
PCDHGA7Q9Y5G6 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGA7Q9Y5G6 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.24■■□□□ 1.31
PCDHGA7Q9Y5G6 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGA7Q9Y5G6 AC087393.1-201ENST00000582896 145 ntBASIC23.24■■□□□ 1.31
PCDHGA7Q9Y5G6 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGA7Q9Y5G6 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
PCDHGA7Q9Y5G6 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHGA7Q9Y5G6 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGA7Q9Y5G6 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGA7Q9Y5G6 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGA7Q9Y5G6 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGA7Q9Y5G6 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGA7Q9Y5G6 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.23■■□□□ 1.31
PCDHGA7Q9Y5G6 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGA7Q9Y5G6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHGA7Q9Y5G6 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms