Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC27.35■■□□□ 1.97
CTDP1Q9Y5B0 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
CTDP1Q9Y5B0 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
CTDP1Q9Y5B0 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC27.34■■□□□ 1.97
CTDP1Q9Y5B0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CTDP1Q9Y5B0 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC27.34■■□□□ 1.97
CTDP1Q9Y5B0 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CTDP1Q9Y5B0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
CTDP1Q9Y5B0 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC27.33■■□□□ 1.97
CTDP1Q9Y5B0 MTURN-203ENST00000409688 843 ntTSL 2 BASIC27.33■■□□□ 1.97
CTDP1Q9Y5B0 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC27.33■■□□□ 1.97
CTDP1Q9Y5B0 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC27.33■■□□□ 1.97
CTDP1Q9Y5B0 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CTDP1Q9Y5B0 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
CTDP1Q9Y5B0 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CTDP1Q9Y5B0 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC27.33■■□□□ 1.96
CTDP1Q9Y5B0 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CTDP1Q9Y5B0 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CTDP1Q9Y5B0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC27.32■■□□□ 1.96
CTDP1Q9Y5B0 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC27.32■■□□□ 1.96
CTDP1Q9Y5B0 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC27.32■■□□□ 1.96
CTDP1Q9Y5B0 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC27.32■■□□□ 1.96
CTDP1Q9Y5B0 SSSCA1-AS1-201ENST00000567594 614 ntBASIC27.32■■□□□ 1.96
CTDP1Q9Y5B0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC27.32■■□□□ 1.96
CTDP1Q9Y5B0 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC27.32■■□□□ 1.96
CTDP1Q9Y5B0 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CTDP1Q9Y5B0 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
CTDP1Q9Y5B0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CTDP1Q9Y5B0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC27.31■■□□□ 1.96
CTDP1Q9Y5B0 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CTDP1Q9Y5B0 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CTDP1Q9Y5B0 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
CTDP1Q9Y5B0 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CTDP1Q9Y5B0 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC27.31■■□□□ 1.96
CTDP1Q9Y5B0 AC092028.1-203ENST00000608262 953 ntBASIC27.31■■□□□ 1.96
CTDP1Q9Y5B0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC27.31■■□□□ 1.96
CTDP1Q9Y5B0 FOXO3B-201ENST00000395675 1928 ntBASIC27.31■■□□□ 1.96
CTDP1Q9Y5B0 AC008406.3-201ENST00000620001 1374 ntBASIC27.31■■□□□ 1.96
CTDP1Q9Y5B0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
CTDP1Q9Y5B0 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CTDP1Q9Y5B0 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
CTDP1Q9Y5B0 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
CTDP1Q9Y5B0 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
CTDP1Q9Y5B0 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CTDP1Q9Y5B0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC27.29■■□□□ 1.96
CTDP1Q9Y5B0 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC27.29■■□□□ 1.96
CTDP1Q9Y5B0 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC27.29■■□□□ 1.96
CTDP1Q9Y5B0 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CTDP1Q9Y5B0 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
CTDP1Q9Y5B0 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
CTDP1Q9Y5B0 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CTDP1Q9Y5B0 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC27.28■■□□□ 1.96
CTDP1Q9Y5B0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC27.28■■□□□ 1.96
CTDP1Q9Y5B0 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
CTDP1Q9Y5B0 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CTDP1Q9Y5B0 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
CTDP1Q9Y5B0 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
CTDP1Q9Y5B0 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC27.27■■□□□ 1.96
CTDP1Q9Y5B0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC27.27■■□□□ 1.96
CTDP1Q9Y5B0 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CTDP1Q9Y5B0 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CTDP1Q9Y5B0 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC27.26■■□□□ 1.95
CTDP1Q9Y5B0 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CTDP1Q9Y5B0 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CTDP1Q9Y5B0 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CTDP1Q9Y5B0 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CTDP1Q9Y5B0 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC27.25■■□□□ 1.95
CTDP1Q9Y5B0 ERN1-208ENST00000606895 2068 ntBASIC27.25■■□□□ 1.95
CTDP1Q9Y5B0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC27.24■■□□□ 1.95
CTDP1Q9Y5B0 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC27.24■■□□□ 1.95
CTDP1Q9Y5B0 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC27.24■■□□□ 1.95
CTDP1Q9Y5B0 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
CTDP1Q9Y5B0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC27.24■■□□□ 1.95
CTDP1Q9Y5B0 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CTDP1Q9Y5B0 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CTDP1Q9Y5B0 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CTDP1Q9Y5B0 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CTDP1Q9Y5B0 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC27.23■■□□□ 1.95
CTDP1Q9Y5B0 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CTDP1Q9Y5B0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CTDP1Q9Y5B0 MTDHP2-201ENST00000601468 714 ntBASIC27.23■■□□□ 1.95
CTDP1Q9Y5B0 AC097639.1-201ENST00000565519 1891 ntBASIC27.23■■□□□ 1.95
CTDP1Q9Y5B0 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CTDP1Q9Y5B0 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CTDP1Q9Y5B0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
CTDP1Q9Y5B0 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC27.22■■□□□ 1.95
CTDP1Q9Y5B0 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CTDP1Q9Y5B0 AC010997.5-201ENST00000609182 354 ntBASIC27.21■■□□□ 1.95
CTDP1Q9Y5B0 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CTDP1Q9Y5B0 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
CTDP1Q9Y5B0 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
CTDP1Q9Y5B0 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.95
CTDP1Q9Y5B0 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
CTDP1Q9Y5B0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC27.2■■□□□ 1.94
CTDP1Q9Y5B0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC27.2■■□□□ 1.94
CTDP1Q9Y5B0 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
CTDP1Q9Y5B0 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
CTDP1Q9Y5B0 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
CTDP1Q9Y5B0 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
CTDP1Q9Y5B0 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms