Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.08■□□□□ 0.97
EXOSC1Q9Y3B2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.08■□□□□ 0.97
EXOSC1Q9Y3B2 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.08■□□□□ 0.97
EXOSC1Q9Y3B2 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
EXOSC1Q9Y3B2 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
EXOSC1Q9Y3B2 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
EXOSC1Q9Y3B2 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.08■□□□□ 0.97
EXOSC1Q9Y3B2 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.08■□□□□ 0.97
EXOSC1Q9Y3B2 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
EXOSC1Q9Y3B2 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.08■□□□□ 0.96
EXOSC1Q9Y3B2 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
EXOSC1Q9Y3B2 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
EXOSC1Q9Y3B2 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
EXOSC1Q9Y3B2 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
EXOSC1Q9Y3B2 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
EXOSC1Q9Y3B2 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
EXOSC1Q9Y3B2 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
EXOSC1Q9Y3B2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
EXOSC1Q9Y3B2 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
EXOSC1Q9Y3B2 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
EXOSC1Q9Y3B2 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
EXOSC1Q9Y3B2 AC004812.2-201ENST00000611079 2094 ntBASIC21.06■□□□□ 0.96
EXOSC1Q9Y3B2 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.06■□□□□ 0.96
EXOSC1Q9Y3B2 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
EXOSC1Q9Y3B2 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
EXOSC1Q9Y3B2 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.06■□□□□ 0.96
EXOSC1Q9Y3B2 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.06■□□□□ 0.96
EXOSC1Q9Y3B2 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.06■□□□□ 0.96
EXOSC1Q9Y3B2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EXOSC1Q9Y3B2 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.05■□□□□ 0.96
EXOSC1Q9Y3B2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.05■□□□□ 0.96
EXOSC1Q9Y3B2 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
EXOSC1Q9Y3B2 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.05■□□□□ 0.96
EXOSC1Q9Y3B2 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EXOSC1Q9Y3B2 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.04■□□□□ 0.96
EXOSC1Q9Y3B2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
EXOSC1Q9Y3B2 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
EXOSC1Q9Y3B2 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EXOSC1Q9Y3B2 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
EXOSC1Q9Y3B2 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EXOSC1Q9Y3B2 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
EXOSC1Q9Y3B2 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
EXOSC1Q9Y3B2 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
EXOSC1Q9Y3B2 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
EXOSC1Q9Y3B2 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.04■□□□□ 0.96
EXOSC1Q9Y3B2 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EXOSC1Q9Y3B2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
EXOSC1Q9Y3B2 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EXOSC1Q9Y3B2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.03■□□□□ 0.96
EXOSC1Q9Y3B2 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
EXOSC1Q9Y3B2 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.03■□□□□ 0.96
EXOSC1Q9Y3B2 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EXOSC1Q9Y3B2 MIR6089-201ENST00000616698 64 ntBASIC21.03■□□□□ 0.96
EXOSC1Q9Y3B2 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.03■□□□□ 0.96
EXOSC1Q9Y3B2 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.03■□□□□ 0.96
EXOSC1Q9Y3B2 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EXOSC1Q9Y3B2 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
EXOSC1Q9Y3B2 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EXOSC1Q9Y3B2 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
EXOSC1Q9Y3B2 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EXOSC1Q9Y3B2 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
EXOSC1Q9Y3B2 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.01■□□□□ 0.95
EXOSC1Q9Y3B2 HLA-V-202ENST00000446817 847 ntBASIC21.01■□□□□ 0.95
EXOSC1Q9Y3B2 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.01■□□□□ 0.95
EXOSC1Q9Y3B2 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
EXOSC1Q9Y3B2 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.01■□□□□ 0.95
EXOSC1Q9Y3B2 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
EXOSC1Q9Y3B2 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
EXOSC1Q9Y3B2 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
EXOSC1Q9Y3B2 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
EXOSC1Q9Y3B2 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
EXOSC1Q9Y3B2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21■□□□□ 0.95
EXOSC1Q9Y3B2 AC126177.7-201ENST00000547904 679 ntBASIC21■□□□□ 0.95
EXOSC1Q9Y3B2 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21■□□□□ 0.95
EXOSC1Q9Y3B2 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21■□□□□ 0.95
EXOSC1Q9Y3B2 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
EXOSC1Q9Y3B2 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.99■□□□□ 0.95
EXOSC1Q9Y3B2 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.99■□□□□ 0.95
EXOSC1Q9Y3B2 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EXOSC1Q9Y3B2 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EXOSC1Q9Y3B2 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EXOSC1Q9Y3B2 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
EXOSC1Q9Y3B2 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
EXOSC1Q9Y3B2 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.99■□□□□ 0.95
EXOSC1Q9Y3B2 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
EXOSC1Q9Y3B2 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.99■□□□□ 0.95
EXOSC1Q9Y3B2 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
EXOSC1Q9Y3B2 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
EXOSC1Q9Y3B2 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.98■□□□□ 0.95
EXOSC1Q9Y3B2 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
EXOSC1Q9Y3B2 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
EXOSC1Q9Y3B2 ABCB10P4-201ENST00000566803 2184 ntBASIC20.97■□□□□ 0.95
EXOSC1Q9Y3B2 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
EXOSC1Q9Y3B2 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EXOSC1Q9Y3B2 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
EXOSC1Q9Y3B2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
EXOSC1Q9Y3B2 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
EXOSC1Q9Y3B2 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
EXOSC1Q9Y3B2 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.95■□□□□ 0.94
EXOSC1Q9Y3B2 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms