Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.26■□□□□ 0.83
MRPS28Q9Y2Q9 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MRPS28Q9Y2Q9 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MRPS28Q9Y2Q9 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.25■□□□□ 0.83
MRPS28Q9Y2Q9 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MRPS28Q9Y2Q9 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MRPS28Q9Y2Q9 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MRPS28Q9Y2Q9 AC141586.4-201ENST00000624558 1573 ntBASIC20.25■□□□□ 0.83
MRPS28Q9Y2Q9 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
MRPS28Q9Y2Q9 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.24■□□□□ 0.83
MRPS28Q9Y2Q9 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.24■□□□□ 0.83
MRPS28Q9Y2Q9 AC060814.1-201ENST00000554326 538 ntBASIC20.24■□□□□ 0.83
MRPS28Q9Y2Q9 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MRPS28Q9Y2Q9 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.23■□□□□ 0.83
MRPS28Q9Y2Q9 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.23■□□□□ 0.83
MRPS28Q9Y2Q9 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MRPS28Q9Y2Q9 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MRPS28Q9Y2Q9 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MRPS28Q9Y2Q9 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MRPS28Q9Y2Q9 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MRPS28Q9Y2Q9 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.23■□□□□ 0.83
MRPS28Q9Y2Q9 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.23■□□□□ 0.83
MRPS28Q9Y2Q9 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
MRPS28Q9Y2Q9 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MRPS28Q9Y2Q9 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
MRPS28Q9Y2Q9 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
MRPS28Q9Y2Q9 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MRPS28Q9Y2Q9 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MRPS28Q9Y2Q9 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MRPS28Q9Y2Q9 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
MRPS28Q9Y2Q9 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
MRPS28Q9Y2Q9 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MRPS28Q9Y2Q9 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MRPS28Q9Y2Q9 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.22■□□□□ 0.83
MRPS28Q9Y2Q9 SMPD5-203ENST00000639008 1464 ntBASIC20.22■□□□□ 0.83
MRPS28Q9Y2Q9 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
MRPS28Q9Y2Q9 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
MRPS28Q9Y2Q9 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.21■□□□□ 0.83
MRPS28Q9Y2Q9 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MRPS28Q9Y2Q9 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.21■□□□□ 0.83
MRPS28Q9Y2Q9 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MRPS28Q9Y2Q9 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MRPS28Q9Y2Q9 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
MRPS28Q9Y2Q9 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.21■□□□□ 0.83
MRPS28Q9Y2Q9 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MRPS28Q9Y2Q9 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
MRPS28Q9Y2Q9 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
MRPS28Q9Y2Q9 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MRPS28Q9Y2Q9 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.2■□□□□ 0.82
MRPS28Q9Y2Q9 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.2■□□□□ 0.82
MRPS28Q9Y2Q9 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MRPS28Q9Y2Q9 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MRPS28Q9Y2Q9 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.2■□□□□ 0.82
MRPS28Q9Y2Q9 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.2■□□□□ 0.82
MRPS28Q9Y2Q9 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
MRPS28Q9Y2Q9 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MRPS28Q9Y2Q9 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MRPS28Q9Y2Q9 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.19■□□□□ 0.82
MRPS28Q9Y2Q9 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MRPS28Q9Y2Q9 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MRPS28Q9Y2Q9 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
MRPS28Q9Y2Q9 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MRPS28Q9Y2Q9 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MRPS28Q9Y2Q9 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MRPS28Q9Y2Q9 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MRPS28Q9Y2Q9 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
MRPS28Q9Y2Q9 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MRPS28Q9Y2Q9 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MRPS28Q9Y2Q9 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MRPS28Q9Y2Q9 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MRPS28Q9Y2Q9 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MRPS28Q9Y2Q9 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
MRPS28Q9Y2Q9 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
MRPS28Q9Y2Q9 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
MRPS28Q9Y2Q9 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MRPS28Q9Y2Q9 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MRPS28Q9Y2Q9 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MRPS28Q9Y2Q9 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MRPS28Q9Y2Q9 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MRPS28Q9Y2Q9 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.17■□□□□ 0.82
MRPS28Q9Y2Q9 MIR6089-201ENST00000616698 64 ntBASIC20.17■□□□□ 0.82
MRPS28Q9Y2Q9 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
MRPS28Q9Y2Q9 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
MRPS28Q9Y2Q9 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.17■□□□□ 0.82
MRPS28Q9Y2Q9 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MRPS28Q9Y2Q9 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MRPS28Q9Y2Q9 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
MRPS28Q9Y2Q9 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MRPS28Q9Y2Q9 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
MRPS28Q9Y2Q9 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.16■□□□□ 0.82
MRPS28Q9Y2Q9 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.16■□□□□ 0.82
MRPS28Q9Y2Q9 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
MRPS28Q9Y2Q9 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.16■□□□□ 0.82
MRPS28Q9Y2Q9 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
MRPS28Q9Y2Q9 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MRPS28Q9Y2Q9 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
MRPS28Q9Y2Q9 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
MRPS28Q9Y2Q9 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.15■□□□□ 0.82
MRPS28Q9Y2Q9 AC092296.2-201ENST00000589470 999 ntBASIC20.15■□□□□ 0.82
MRPS28Q9Y2Q9 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms