Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
MACF1Q9UPN3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
MACF1Q9UPN3 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC10.05□□□□□ -0.8
MACF1Q9UPN3 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
MACF1Q9UPN3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC10.05□□□□□ -0.8
MACF1Q9UPN3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC10.05□□□□□ -0.8
MACF1Q9UPN3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC10.05□□□□□ -0.8
MACF1Q9UPN3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
MACF1Q9UPN3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
MACF1Q9UPN3 SYT6-210ENST00000641643 1587 ntBASIC10.05□□□□□ -0.8
MACF1Q9UPN3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
MACF1Q9UPN3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
MACF1Q9UPN3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC10.05□□□□□ -0.8
MACF1Q9UPN3 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
MACF1Q9UPN3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC10.05□□□□□ -0.8
MACF1Q9UPN3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC10.05□□□□□ -0.8
MACF1Q9UPN3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
MACF1Q9UPN3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
MACF1Q9UPN3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
MACF1Q9UPN3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC10.05□□□□□ -0.8
MACF1Q9UPN3 AC080038.1-201ENST00000611274 1154 ntBASIC10.05□□□□□ -0.8
MACF1Q9UPN3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC10.04□□□□□ -0.8
MACF1Q9UPN3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
MACF1Q9UPN3 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
MACF1Q9UPN3 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
MACF1Q9UPN3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
MACF1Q9UPN3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
MACF1Q9UPN3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
MACF1Q9UPN3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
MACF1Q9UPN3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC10.04□□□□□ -0.8
MACF1Q9UPN3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC10.04□□□□□ -0.8
MACF1Q9UPN3 AK1-201ENST00000223836 736 ntTSL 3 BASIC10.03□□□□□ -0.8
MACF1Q9UPN3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
MACF1Q9UPN3 CROCCP5-201ENST00000436658 830 ntBASIC10.03□□□□□ -0.8
MACF1Q9UPN3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
MACF1Q9UPN3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC10.03□□□□□ -0.8
MACF1Q9UPN3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC10.03□□□□□ -0.8
MACF1Q9UPN3 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
MACF1Q9UPN3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC10.03□□□□□ -0.8
MACF1Q9UPN3 MIR4281-201ENST00000580852 62 ntBASIC10.03□□□□□ -0.8
MACF1Q9UPN3 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
MACF1Q9UPN3 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
MACF1Q9UPN3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
MACF1Q9UPN3 AL109923.1-201ENST00000618799 583 ntBASIC10.03□□□□□ -0.8
MACF1Q9UPN3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
MACF1Q9UPN3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC10.03□□□□□ -0.8
MACF1Q9UPN3 SMUG1P1-201ENST00000590640 811 ntBASIC10.03□□□□□ -0.8
MACF1Q9UPN3 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
MACF1Q9UPN3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
MACF1Q9UPN3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
MACF1Q9UPN3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
MACF1Q9UPN3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
MACF1Q9UPN3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC10.01□□□□□ -0.81
MACF1Q9UPN3 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC10.01□□□□□ -0.81
MACF1Q9UPN3 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
MACF1Q9UPN3 CD72-202ENST00000378430 585 ntTSL 3 BASIC10.01□□□□□ -0.81
MACF1Q9UPN3 AC006970.2-201ENST00000450065 779 ntBASIC10.01□□□□□ -0.81
MACF1Q9UPN3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC10.01□□□□□ -0.81
MACF1Q9UPN3 MIR4651-201ENST00000582622 73 ntBASIC10.01□□□□□ -0.81
MACF1Q9UPN3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC10.01□□□□□ -0.81
MACF1Q9UPN3 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
MACF1Q9UPN3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC10.01□□□□□ -0.81
MACF1Q9UPN3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC10.01□□□□□ -0.81
MACF1Q9UPN3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC10.01□□□□□ -0.81
MACF1Q9UPN3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
MACF1Q9UPN3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
MACF1Q9UPN3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC10.01□□□□□ -0.81
MACF1Q9UPN3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC10.01□□□□□ -0.81
MACF1Q9UPN3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC10□□□□□ -0.81
MACF1Q9UPN3 NCF1B-203ENST00000435988 1254 ntBASIC10□□□□□ -0.81
MACF1Q9UPN3 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC10□□□□□ -0.81
MACF1Q9UPN3 GAS2L1P2-201ENST00000436355 1356 ntBASIC10□□□□□ -0.81
MACF1Q9UPN3 DUX4L19-201ENST00000557448 1267 ntBASIC10□□□□□ -0.81
MACF1Q9UPN3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC10□□□□□ -0.81
MACF1Q9UPN3 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC10□□□□□ -0.81
MACF1Q9UPN3 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
MACF1Q9UPN3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC10□□□□□ -0.81
MACF1Q9UPN3 GXYLT1P2-201ENST00000433312 1230 ntBASIC10□□□□□ -0.81
MACF1Q9UPN3 MIR1224-201ENST00000408193 85 ntBASIC9.99□□□□□ -0.81
MACF1Q9UPN3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC9.99□□□□□ -0.81
MACF1Q9UPN3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
MACF1Q9UPN3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC9.99□□□□□ -0.81
MACF1Q9UPN3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC9.99□□□□□ -0.81
MACF1Q9UPN3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC9.99□□□□□ -0.81
MACF1Q9UPN3 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
MACF1Q9UPN3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC9.99□□□□□ -0.81
MACF1Q9UPN3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC9.99□□□□□ -0.81
MACF1Q9UPN3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC9.99□□□□□ -0.81
MACF1Q9UPN3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
MACF1Q9UPN3 AC027612.3-201ENST00000413684 1047 ntBASIC9.99□□□□□ -0.81
MACF1Q9UPN3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
MACF1Q9UPN3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
MACF1Q9UPN3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
MACF1Q9UPN3 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
MACF1Q9UPN3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC9.99□□□□□ -0.81
MACF1Q9UPN3 AC026185.1-201ENST00000445748 174 ntBASIC9.99□□□□□ -0.81
MACF1Q9UPN3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
MACF1Q9UPN3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
MACF1Q9UPN3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
MACF1Q9UPN3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC9.98□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms