Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 Z92544.1-202ENST00000571933 1220 ntBASIC21.71■■□□□ 1.07
NPIPA1Q9UND3 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NPIPA1Q9UND3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NPIPA1Q9UND3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NPIPA1Q9UND3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.7■■□□□ 1.06
NPIPA1Q9UND3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NPIPA1Q9UND3 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.7■■□□□ 1.06
NPIPA1Q9UND3 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NPIPA1Q9UND3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
NPIPA1Q9UND3 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NPIPA1Q9UND3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NPIPA1Q9UND3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NPIPA1Q9UND3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NPIPA1Q9UND3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NPIPA1Q9UND3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.69■■□□□ 1.06
NPIPA1Q9UND3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NPIPA1Q9UND3 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.69■■□□□ 1.06
NPIPA1Q9UND3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NPIPA1Q9UND3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NPIPA1Q9UND3 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NPIPA1Q9UND3 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NPIPA1Q9UND3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
NPIPA1Q9UND3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
NPIPA1Q9UND3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.68■■□□□ 1.06
NPIPA1Q9UND3 KRT125P-201ENST00000546827 989 ntBASIC21.68■■□□□ 1.06
NPIPA1Q9UND3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.68■■□□□ 1.06
NPIPA1Q9UND3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NPIPA1Q9UND3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NPIPA1Q9UND3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.68■■□□□ 1.06
NPIPA1Q9UND3 ERN1-208ENST00000606895 2068 ntBASIC21.67■■□□□ 1.06
NPIPA1Q9UND3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NPIPA1Q9UND3 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NPIPA1Q9UND3 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
NPIPA1Q9UND3 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NPIPA1Q9UND3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NPIPA1Q9UND3 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.67■■□□□ 1.06
NPIPA1Q9UND3 BX664725.1-201ENST00000438252 379 ntBASIC21.67■■□□□ 1.06
NPIPA1Q9UND3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
NPIPA1Q9UND3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
NPIPA1Q9UND3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
NPIPA1Q9UND3 AC010501.1-201ENST00000606270 1962 ntBASIC21.67■■□□□ 1.06
NPIPA1Q9UND3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NPIPA1Q9UND3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NPIPA1Q9UND3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NPIPA1Q9UND3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NPIPA1Q9UND3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.66■■□□□ 1.06
NPIPA1Q9UND3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
NPIPA1Q9UND3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NPIPA1Q9UND3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NPIPA1Q9UND3 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NPIPA1Q9UND3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NPIPA1Q9UND3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.65■■□□□ 1.06
NPIPA1Q9UND3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NPIPA1Q9UND3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NPIPA1Q9UND3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.65■■□□□ 1.06
NPIPA1Q9UND3 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.65■■□□□ 1.06
NPIPA1Q9UND3 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
NPIPA1Q9UND3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.65■■□□□ 1.06
NPIPA1Q9UND3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.64■■□□□ 1.06
NPIPA1Q9UND3 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
NPIPA1Q9UND3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
NPIPA1Q9UND3 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NPIPA1Q9UND3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
NPIPA1Q9UND3 KRT18P24-201ENST00000344739 1156 ntBASIC21.64■■□□□ 1.05
NPIPA1Q9UND3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
NPIPA1Q9UND3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
NPIPA1Q9UND3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.64■■□□□ 1.05
NPIPA1Q9UND3 MIR4787-201ENST00000607364 84 ntBASIC21.64■■□□□ 1.05
NPIPA1Q9UND3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NPIPA1Q9UND3 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.64■■□□□ 1.05
NPIPA1Q9UND3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NPIPA1Q9UND3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.63■■□□□ 1.05
NPIPA1Q9UND3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.63■■□□□ 1.05
NPIPA1Q9UND3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NPIPA1Q9UND3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NPIPA1Q9UND3 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NPIPA1Q9UND3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NPIPA1Q9UND3 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
NPIPA1Q9UND3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
NPIPA1Q9UND3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
NPIPA1Q9UND3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.62■■□□□ 1.05
NPIPA1Q9UND3 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.61■■□□□ 1.05
NPIPA1Q9UND3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NPIPA1Q9UND3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NPIPA1Q9UND3 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NPIPA1Q9UND3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NPIPA1Q9UND3 AC120024.1-201ENST00000562672 995 ntBASIC21.61■■□□□ 1.05
NPIPA1Q9UND3 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.61■■□□□ 1.05
NPIPA1Q9UND3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.61■■□□□ 1.05
NPIPA1Q9UND3 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NPIPA1Q9UND3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NPIPA1Q9UND3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NPIPA1Q9UND3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
NPIPA1Q9UND3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NPIPA1Q9UND3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NPIPA1Q9UND3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.6■■□□□ 1.05
NPIPA1Q9UND3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NPIPA1Q9UND3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NPIPA1Q9UND3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
NPIPA1Q9UND3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms