Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC27.08■■□□□ 1.93
DDX41Q9UJV9 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.92
DDX41Q9UJV9 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC27.08■■□□□ 1.92
DDX41Q9UJV9 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
DDX41Q9UJV9 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC27.07■■□□□ 1.92
DDX41Q9UJV9 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
DDX41Q9UJV9 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
DDX41Q9UJV9 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
DDX41Q9UJV9 RNF146-205ENST00000477776 762 ntTSL 3 BASIC27.07■■□□□ 1.92
DDX41Q9UJV9 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
DDX41Q9UJV9 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC27.07■■□□□ 1.92
DDX41Q9UJV9 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
DDX41Q9UJV9 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
DDX41Q9UJV9 AC091060.1-201ENST00000623524 1766 ntBASIC27.07■■□□□ 1.92
DDX41Q9UJV9 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
DDX41Q9UJV9 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC27.06■■□□□ 1.92
DDX41Q9UJV9 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
DDX41Q9UJV9 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
DDX41Q9UJV9 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
DDX41Q9UJV9 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
DDX41Q9UJV9 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC27.05■■□□□ 1.92
DDX41Q9UJV9 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC27.05■■□□□ 1.92
DDX41Q9UJV9 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
DDX41Q9UJV9 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC27.04■■□□□ 1.92
DDX41Q9UJV9 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
DDX41Q9UJV9 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
DDX41Q9UJV9 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
DDX41Q9UJV9 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC27.03■■□□□ 1.92
DDX41Q9UJV9 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
DDX41Q9UJV9 AC239859.2-201ENST00000444165 318 ntBASIC27.03■■□□□ 1.92
DDX41Q9UJV9 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
DDX41Q9UJV9 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC27.02■■□□□ 1.92
DDX41Q9UJV9 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC27.02■■□□□ 1.92
DDX41Q9UJV9 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
DDX41Q9UJV9 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC27.02■■□□□ 1.92
DDX41Q9UJV9 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC27.02■■□□□ 1.92
DDX41Q9UJV9 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC27.02■■□□□ 1.92
DDX41Q9UJV9 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC27.02■■□□□ 1.92
DDX41Q9UJV9 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
DDX41Q9UJV9 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
DDX41Q9UJV9 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.92
DDX41Q9UJV9 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
DDX41Q9UJV9 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC27.01■■□□□ 1.91
DDX41Q9UJV9 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC27.01■■□□□ 1.91
DDX41Q9UJV9 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
DDX41Q9UJV9 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
DDX41Q9UJV9 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC27■■□□□ 1.91
DDX41Q9UJV9 KRT18P24-201ENST00000344739 1156 ntBASIC27■■□□□ 1.91
DDX41Q9UJV9 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC27■■□□□ 1.91
DDX41Q9UJV9 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC27■■□□□ 1.91
DDX41Q9UJV9 Z92544.1-202ENST00000571933 1220 ntBASIC27■■□□□ 1.91
DDX41Q9UJV9 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
DDX41Q9UJV9 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
DDX41Q9UJV9 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
DDX41Q9UJV9 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.99■■□□□ 1.91
DDX41Q9UJV9 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
DDX41Q9UJV9 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.99■■□□□ 1.91
DDX41Q9UJV9 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC26.99■■□□□ 1.91
DDX41Q9UJV9 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.99■■□□□ 1.91
DDX41Q9UJV9 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
DDX41Q9UJV9 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
DDX41Q9UJV9 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
DDX41Q9UJV9 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
DDX41Q9UJV9 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.98■■□□□ 1.91
DDX41Q9UJV9 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.97■■□□□ 1.91
DDX41Q9UJV9 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.97■■□□□ 1.91
DDX41Q9UJV9 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.96■■□□□ 1.91
DDX41Q9UJV9 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC26.96■■□□□ 1.91
DDX41Q9UJV9 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC26.96■■□□□ 1.91
DDX41Q9UJV9 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
DDX41Q9UJV9 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.96■■□□□ 1.91
DDX41Q9UJV9 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC26.95■■□□□ 1.91
DDX41Q9UJV9 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.91
DDX41Q9UJV9 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC26.95■■□□□ 1.91
DDX41Q9UJV9 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.9
DDX41Q9UJV9 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC26.95■■□□□ 1.9
DDX41Q9UJV9 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
DDX41Q9UJV9 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC26.95■■□□□ 1.9
DDX41Q9UJV9 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.9
DDX41Q9UJV9 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26.95■■□□□ 1.9
DDX41Q9UJV9 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
DDX41Q9UJV9 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.9
DDX41Q9UJV9 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
DDX41Q9UJV9 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
DDX41Q9UJV9 THA1P-201ENST00000590384 1145 ntBASIC26.94■■□□□ 1.9
DDX41Q9UJV9 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
DDX41Q9UJV9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
DDX41Q9UJV9 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
DDX41Q9UJV9 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
DDX41Q9UJV9 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
DDX41Q9UJV9 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.93■■□□□ 1.9
DDX41Q9UJV9 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
DDX41Q9UJV9 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
DDX41Q9UJV9 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
DDX41Q9UJV9 AL356441.2-201ENST00000443009 864 ntBASIC26.92■■□□□ 1.9
DDX41Q9UJV9 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC26.92■■□□□ 1.9
DDX41Q9UJV9 AC120024.1-201ENST00000562672 995 ntBASIC26.92■■□□□ 1.9
DDX41Q9UJV9 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC26.92■■□□□ 1.9
DDX41Q9UJV9 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
DDX41Q9UJV9 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms