Protein–RNA interactions for Protein: Q9NZP6

NPAP1, Nuclear pore-associated protein 1, humanhuman

Predictions only

Length 1,156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAP1Q9NZP6 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
NPAP1Q9NZP6 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.32■■□□□ 1
NPAP1Q9NZP6 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NPAP1Q9NZP6 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NPAP1Q9NZP6 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.32■■□□□ 1
NPAP1Q9NZP6 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.32■■□□□ 1
NPAP1Q9NZP6 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.32■■□□□ 1
NPAP1Q9NZP6 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NPAP1Q9NZP6 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
NPAP1Q9NZP6 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NPAP1Q9NZP6 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
NPAP1Q9NZP6 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.31■■□□□ 1
NPAP1Q9NZP6 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.31■■□□□ 1
NPAP1Q9NZP6 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.31■■□□□ 1
NPAP1Q9NZP6 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NPAP1Q9NZP6 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NPAP1Q9NZP6 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
NPAP1Q9NZP6 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NPAP1Q9NZP6 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NPAP1Q9NZP6 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.3■■□□□ 1
NPAP1Q9NZP6 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
NPAP1Q9NZP6 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.29■■□□□ 1
NPAP1Q9NZP6 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
NPAP1Q9NZP6 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.29■■□□□ 1
NPAP1Q9NZP6 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.29■■□□□ 1
NPAP1Q9NZP6 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NPAP1Q9NZP6 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NPAP1Q9NZP6 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NPAP1Q9NZP6 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NPAP1Q9NZP6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NPAP1Q9NZP6 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.28■■□□□ 1
NPAP1Q9NZP6 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NPAP1Q9NZP6 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.28■■□□□ 1
NPAP1Q9NZP6 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
NPAP1Q9NZP6 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.27■■□□□ 1
NPAP1Q9NZP6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
NPAP1Q9NZP6 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
NPAP1Q9NZP6 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NPAP1Q9NZP6 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.27■■□□□ 1
NPAP1Q9NZP6 SPCS2P3-201ENST00000500401 656 ntBASIC21.27■■□□□ 1
NPAP1Q9NZP6 DUX4L18-201ENST00000553347 1267 ntBASIC21.27■■□□□ 1
NPAP1Q9NZP6 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
NPAP1Q9NZP6 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NPAP1Q9NZP6 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NPAP1Q9NZP6 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPAP1Q9NZP6 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPAP1Q9NZP6 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPAP1Q9NZP6 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.26■□□□□ 0.99
NPAP1Q9NZP6 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
NPAP1Q9NZP6 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.26■□□□□ 0.99
NPAP1Q9NZP6 DUX4L9-201ENST00000449051 1259 ntBASIC21.26■□□□□ 0.99
NPAP1Q9NZP6 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.26■□□□□ 0.99
NPAP1Q9NZP6 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NPAP1Q9NZP6 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
NPAP1Q9NZP6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NPAP1Q9NZP6 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NPAP1Q9NZP6 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
NPAP1Q9NZP6 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
NPAP1Q9NZP6 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NPAP1Q9NZP6 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
NPAP1Q9NZP6 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NPAP1Q9NZP6 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NPAP1Q9NZP6 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NPAP1Q9NZP6 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
NPAP1Q9NZP6 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NPAP1Q9NZP6 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NPAP1Q9NZP6 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.24■□□□□ 0.99
NPAP1Q9NZP6 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.24■□□□□ 0.99
NPAP1Q9NZP6 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NPAP1Q9NZP6 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
NPAP1Q9NZP6 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NPAP1Q9NZP6 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NPAP1Q9NZP6 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
NPAP1Q9NZP6 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
NPAP1Q9NZP6 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
NPAP1Q9NZP6 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.23■□□□□ 0.99
NPAP1Q9NZP6 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NPAP1Q9NZP6 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NPAP1Q9NZP6 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NPAP1Q9NZP6 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
NPAP1Q9NZP6 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
NPAP1Q9NZP6 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
NPAP1Q9NZP6 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NPAP1Q9NZP6 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NPAP1Q9NZP6 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
NPAP1Q9NZP6 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
NPAP1Q9NZP6 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.22■□□□□ 0.99
NPAP1Q9NZP6 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NPAP1Q9NZP6 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
NPAP1Q9NZP6 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NPAP1Q9NZP6 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NPAP1Q9NZP6 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NPAP1Q9NZP6 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
NPAP1Q9NZP6 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NPAP1Q9NZP6 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
NPAP1Q9NZP6 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
NPAP1Q9NZP6 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
NPAP1Q9NZP6 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.2■□□□□ 0.98
NPAP1Q9NZP6 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPAP1Q9NZP6 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms