Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBQLN4Q9NRR5 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
UBQLN4Q9NRR5 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
UBQLN4Q9NRR5 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.71■■□□□ 1.07
UBQLN4Q9NRR5 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
UBQLN4Q9NRR5 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.71■■□□□ 1.07
UBQLN4Q9NRR5 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.71■■□□□ 1.07
UBQLN4Q9NRR5 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
UBQLN4Q9NRR5 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
UBQLN4Q9NRR5 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
UBQLN4Q9NRR5 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
UBQLN4Q9NRR5 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
UBQLN4Q9NRR5 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
UBQLN4Q9NRR5 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBQLN4Q9NRR5 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBQLN4Q9NRR5 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBQLN4Q9NRR5 AC139795.1-202ENST00000500444 432 ntBASIC21.7■■□□□ 1.06
UBQLN4Q9NRR5 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBQLN4Q9NRR5 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBQLN4Q9NRR5 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
UBQLN4Q9NRR5 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBQLN4Q9NRR5 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
UBQLN4Q9NRR5 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
UBQLN4Q9NRR5 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.69■■□□□ 1.06
UBQLN4Q9NRR5 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.69■■□□□ 1.06
UBQLN4Q9NRR5 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.69■■□□□ 1.06
UBQLN4Q9NRR5 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBQLN4Q9NRR5 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBQLN4Q9NRR5 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
UBQLN4Q9NRR5 LONRF2P2-201ENST00000439212 571 ntBASIC21.69■■□□□ 1.06
UBQLN4Q9NRR5 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
UBQLN4Q9NRR5 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBQLN4Q9NRR5 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBQLN4Q9NRR5 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
UBQLN4Q9NRR5 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBQLN4Q9NRR5 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBQLN4Q9NRR5 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.68■■□□□ 1.06
UBQLN4Q9NRR5 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBQLN4Q9NRR5 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBQLN4Q9NRR5 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBQLN4Q9NRR5 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.68■■□□□ 1.06
UBQLN4Q9NRR5 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.68■■□□□ 1.06
UBQLN4Q9NRR5 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBQLN4Q9NRR5 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBQLN4Q9NRR5 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
UBQLN4Q9NRR5 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBQLN4Q9NRR5 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.67■■□□□ 1.06
UBQLN4Q9NRR5 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBQLN4Q9NRR5 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.67■■□□□ 1.06
UBQLN4Q9NRR5 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBQLN4Q9NRR5 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBQLN4Q9NRR5 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
UBQLN4Q9NRR5 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBQLN4Q9NRR5 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBQLN4Q9NRR5 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBQLN4Q9NRR5 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.66■■□□□ 1.06
UBQLN4Q9NRR5 AC019171.1-201ENST00000601251 1056 ntBASIC21.66■■□□□ 1.06
UBQLN4Q9NRR5 BHLHE23-202ENST00000612929 1109 ntBASIC21.66■■□□□ 1.06
UBQLN4Q9NRR5 AC074183.2-201ENST00000623112 922 ntBASIC21.66■■□□□ 1.06
UBQLN4Q9NRR5 AC138932.3-201ENST00000567634 1902 ntBASIC21.66■■□□□ 1.06
UBQLN4Q9NRR5 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
UBQLN4Q9NRR5 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
UBQLN4Q9NRR5 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
UBQLN4Q9NRR5 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.65■■□□□ 1.06
UBQLN4Q9NRR5 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
UBQLN4Q9NRR5 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.65■■□□□ 1.06
UBQLN4Q9NRR5 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.65■■□□□ 1.06
UBQLN4Q9NRR5 AP003733.4-201ENST00000623785 1697 ntBASIC21.65■■□□□ 1.06
UBQLN4Q9NRR5 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.65■■□□□ 1.06
UBQLN4Q9NRR5 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBQLN4Q9NRR5 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
UBQLN4Q9NRR5 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
UBQLN4Q9NRR5 AL592295.1-201ENST00000400984 884 ntBASIC21.64■■□□□ 1.05
UBQLN4Q9NRR5 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
UBQLN4Q9NRR5 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.64■■□□□ 1.05
UBQLN4Q9NRR5 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
UBQLN4Q9NRR5 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
UBQLN4Q9NRR5 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
UBQLN4Q9NRR5 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
UBQLN4Q9NRR5 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBQLN4Q9NRR5 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBQLN4Q9NRR5 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBQLN4Q9NRR5 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBQLN4Q9NRR5 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBQLN4Q9NRR5 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.63■■□□□ 1.05
UBQLN4Q9NRR5 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.63■■□□□ 1.05
UBQLN4Q9NRR5 AL033527.3-201ENST00000566366 1196 ntBASIC21.63■■□□□ 1.05
UBQLN4Q9NRR5 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.63■■□□□ 1.05
UBQLN4Q9NRR5 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBQLN4Q9NRR5 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
UBQLN4Q9NRR5 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.62■■□□□ 1.05
UBQLN4Q9NRR5 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
UBQLN4Q9NRR5 MIR6089-201ENST00000616698 64 ntBASIC21.62■■□□□ 1.05
UBQLN4Q9NRR5 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
UBQLN4Q9NRR5 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.62■■□□□ 1.05
UBQLN4Q9NRR5 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.62■■□□□ 1.05
UBQLN4Q9NRR5 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBQLN4Q9NRR5 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
UBQLN4Q9NRR5 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
UBQLN4Q9NRR5 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms