Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SEC61A2Q9H9S3 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SEC61A2Q9H9S3 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
SEC61A2Q9H9S3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.03■□□□□ 0.96
SEC61A2Q9H9S3 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SEC61A2Q9H9S3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.02■□□□□ 0.96
SEC61A2Q9H9S3 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SEC61A2Q9H9S3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SEC61A2Q9H9S3 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.02■□□□□ 0.96
SEC61A2Q9H9S3 AC142381.3-201ENST00000568208 1670 ntBASIC21.02■□□□□ 0.95
SEC61A2Q9H9S3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
SEC61A2Q9H9S3 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SEC61A2Q9H9S3 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SEC61A2Q9H9S3 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
SEC61A2Q9H9S3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
SEC61A2Q9H9S3 TSPY13P-201ENST00000338964 914 ntBASIC21■□□□□ 0.95
SEC61A2Q9H9S3 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SEC61A2Q9H9S3 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21■□□□□ 0.95
SEC61A2Q9H9S3 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21■□□□□ 0.95
SEC61A2Q9H9S3 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21■□□□□ 0.95
SEC61A2Q9H9S3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
SEC61A2Q9H9S3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SEC61A2Q9H9S3 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SEC61A2Q9H9S3 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21■□□□□ 0.95
SEC61A2Q9H9S3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.99■□□□□ 0.95
SEC61A2Q9H9S3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SEC61A2Q9H9S3 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SEC61A2Q9H9S3 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SEC61A2Q9H9S3 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SEC61A2Q9H9S3 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.99■□□□□ 0.95
SEC61A2Q9H9S3 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SEC61A2Q9H9S3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SEC61A2Q9H9S3 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SEC61A2Q9H9S3 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SEC61A2Q9H9S3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SEC61A2Q9H9S3 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
SEC61A2Q9H9S3 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SEC61A2Q9H9S3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SEC61A2Q9H9S3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SEC61A2Q9H9S3 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SEC61A2Q9H9S3 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SEC61A2Q9H9S3 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
SEC61A2Q9H9S3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SEC61A2Q9H9S3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.97■□□□□ 0.95
SEC61A2Q9H9S3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SEC61A2Q9H9S3 SLC6A10P-202ENST00000431994 2058 ntBASIC20.97■□□□□ 0.95
SEC61A2Q9H9S3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SEC61A2Q9H9S3 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SEC61A2Q9H9S3 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.97■□□□□ 0.95
SEC61A2Q9H9S3 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SEC61A2Q9H9S3 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SEC61A2Q9H9S3 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.97■□□□□ 0.95
SEC61A2Q9H9S3 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SEC61A2Q9H9S3 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.97■□□□□ 0.95
SEC61A2Q9H9S3 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
SEC61A2Q9H9S3 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.97■□□□□ 0.95
SEC61A2Q9H9S3 AC138932.3-201ENST00000567634 1902 ntBASIC20.97■□□□□ 0.95
SEC61A2Q9H9S3 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SEC61A2Q9H9S3 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SEC61A2Q9H9S3 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SEC61A2Q9H9S3 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.96■□□□□ 0.95
SEC61A2Q9H9S3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SEC61A2Q9H9S3 KRT18P10-201ENST00000388836 1287 ntBASIC20.96■□□□□ 0.95
SEC61A2Q9H9S3 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.96■□□□□ 0.95
SEC61A2Q9H9S3 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SEC61A2Q9H9S3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SEC61A2Q9H9S3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.96■□□□□ 0.95
SEC61A2Q9H9S3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SEC61A2Q9H9S3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
SEC61A2Q9H9S3 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SEC61A2Q9H9S3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SEC61A2Q9H9S3 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SEC61A2Q9H9S3 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SEC61A2Q9H9S3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SEC61A2Q9H9S3 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SEC61A2Q9H9S3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
SEC61A2Q9H9S3 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SEC61A2Q9H9S3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SEC61A2Q9H9S3 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SEC61A2Q9H9S3 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SEC61A2Q9H9S3 MIR6765-201ENST00000614092 87 ntBASIC20.94■□□□□ 0.94
SEC61A2Q9H9S3 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SEC61A2Q9H9S3 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SEC61A2Q9H9S3 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SEC61A2Q9H9S3 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SEC61A2Q9H9S3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.93■□□□□ 0.94
SEC61A2Q9H9S3 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SEC61A2Q9H9S3 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SEC61A2Q9H9S3 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SEC61A2Q9H9S3 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.93■□□□□ 0.94
SEC61A2Q9H9S3 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.93■□□□□ 0.94
SEC61A2Q9H9S3 AC018755.3-202ENST00000596210 929 ntBASIC20.93■□□□□ 0.94
SEC61A2Q9H9S3 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.93■□□□□ 0.94
SEC61A2Q9H9S3 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SEC61A2Q9H9S3 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SEC61A2Q9H9S3 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SEC61A2Q9H9S3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.93■□□□□ 0.94
SEC61A2Q9H9S3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
SEC61A2Q9H9S3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SEC61A2Q9H9S3 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms