Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.95■■□□□ 1.42
LRRC40Q9H9A6 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.95■■□□□ 1.42
LRRC40Q9H9A6 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.95■■□□□ 1.42
LRRC40Q9H9A6 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
LRRC40Q9H9A6 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
LRRC40Q9H9A6 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.94■■□□□ 1.42
LRRC40Q9H9A6 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
LRRC40Q9H9A6 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC23.94■■□□□ 1.42
LRRC40Q9H9A6 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
LRRC40Q9H9A6 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
LRRC40Q9H9A6 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.93■■□□□ 1.42
LRRC40Q9H9A6 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
LRRC40Q9H9A6 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
LRRC40Q9H9A6 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.93■■□□□ 1.42
LRRC40Q9H9A6 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
LRRC40Q9H9A6 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.93■■□□□ 1.42
LRRC40Q9H9A6 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.92■■□□□ 1.42
LRRC40Q9H9A6 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
LRRC40Q9H9A6 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.92■■□□□ 1.42
LRRC40Q9H9A6 AC018755.3-202ENST00000596210 929 ntBASIC23.92■■□□□ 1.42
LRRC40Q9H9A6 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.92■■□□□ 1.42
LRRC40Q9H9A6 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
LRRC40Q9H9A6 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
LRRC40Q9H9A6 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
LRRC40Q9H9A6 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
LRRC40Q9H9A6 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.91■■□□□ 1.42
LRRC40Q9H9A6 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.91■■□□□ 1.42
LRRC40Q9H9A6 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.91■■□□□ 1.42
LRRC40Q9H9A6 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.91■■□□□ 1.42
LRRC40Q9H9A6 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
LRRC40Q9H9A6 MIR6089-201ENST00000616698 64 ntBASIC23.91■■□□□ 1.42
LRRC40Q9H9A6 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC23.91■■□□□ 1.42
LRRC40Q9H9A6 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
LRRC40Q9H9A6 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
LRRC40Q9H9A6 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
LRRC40Q9H9A6 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.9■■□□□ 1.42
LRRC40Q9H9A6 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LRRC40Q9H9A6 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
LRRC40Q9H9A6 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
LRRC40Q9H9A6 SPCS2P3-201ENST00000500401 656 ntBASIC23.9■■□□□ 1.42
LRRC40Q9H9A6 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
LRRC40Q9H9A6 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
LRRC40Q9H9A6 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
LRRC40Q9H9A6 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
LRRC40Q9H9A6 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
LRRC40Q9H9A6 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
LRRC40Q9H9A6 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
LRRC40Q9H9A6 U85056.1-201ENST00000616429 682 ntBASIC23.89■■□□□ 1.41
LRRC40Q9H9A6 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.89■■□□□ 1.41
LRRC40Q9H9A6 FOXO3B-201ENST00000395675 1928 ntBASIC23.88■■□□□ 1.41
LRRC40Q9H9A6 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
LRRC40Q9H9A6 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.88■■□□□ 1.41
LRRC40Q9H9A6 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.88■■□□□ 1.41
LRRC40Q9H9A6 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LRRC40Q9H9A6 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LRRC40Q9H9A6 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.88■■□□□ 1.41
LRRC40Q9H9A6 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.88■■□□□ 1.41
LRRC40Q9H9A6 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.88■■□□□ 1.41
LRRC40Q9H9A6 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.87■■□□□ 1.41
LRRC40Q9H9A6 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.87■■□□□ 1.41
LRRC40Q9H9A6 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
LRRC40Q9H9A6 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC23.87■■□□□ 1.41
LRRC40Q9H9A6 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
LRRC40Q9H9A6 RPS2P7-201ENST00000447334 885 ntBASIC23.87■■□□□ 1.41
LRRC40Q9H9A6 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
LRRC40Q9H9A6 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.87■■□□□ 1.41
LRRC40Q9H9A6 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
LRRC40Q9H9A6 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.86■■□□□ 1.41
LRRC40Q9H9A6 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LRRC40Q9H9A6 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
LRRC40Q9H9A6 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC23.86■■□□□ 1.41
LRRC40Q9H9A6 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LRRC40Q9H9A6 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LRRC40Q9H9A6 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
LRRC40Q9H9A6 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.85■■□□□ 1.41
LRRC40Q9H9A6 DUX4L9-201ENST00000449051 1259 ntBASIC23.85■■□□□ 1.41
LRRC40Q9H9A6 MIR6765-201ENST00000614092 87 ntBASIC23.85■■□□□ 1.41
LRRC40Q9H9A6 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
LRRC40Q9H9A6 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.84■■□□□ 1.41
LRRC40Q9H9A6 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LRRC40Q9H9A6 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LRRC40Q9H9A6 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.84■■□□□ 1.41
LRRC40Q9H9A6 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
LRRC40Q9H9A6 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
LRRC40Q9H9A6 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.84■■□□□ 1.41
LRRC40Q9H9A6 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.83■■□□□ 1.4
LRRC40Q9H9A6 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LRRC40Q9H9A6 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.82■■□□□ 1.4
LRRC40Q9H9A6 ABHD17AP5-201ENST00000580133 923 ntBASIC23.82■■□□□ 1.4
LRRC40Q9H9A6 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.82■■□□□ 1.4
LRRC40Q9H9A6 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.82■■□□□ 1.4
LRRC40Q9H9A6 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.82■■□□□ 1.4
LRRC40Q9H9A6 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.82■■□□□ 1.4
LRRC40Q9H9A6 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LRRC40Q9H9A6 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LRRC40Q9H9A6 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
LRRC40Q9H9A6 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.81■■□□□ 1.4
LRRC40Q9H9A6 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC23.81■■□□□ 1.4
LRRC40Q9H9A6 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC23.81■■□□□ 1.4
LRRC40Q9H9A6 AC087393.1-201ENST00000582896 145 ntBASIC23.81■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms