Protein–RNA interactions for Protein: Q99884

SLC6A7, Sodium-dependent proline transporter, humanhuman

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A7Q99884 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC6A7Q99884 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC6A7Q99884 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC6A7Q99884 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.36■□□□□ 0.85
SLC6A7Q99884 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
SLC6A7Q99884 AL157400.5-201ENST00000507624 621 ntBASIC20.36■□□□□ 0.85
SLC6A7Q99884 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SLC6A7Q99884 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC6A7Q99884 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC6A7Q99884 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SLC6A7Q99884 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC6A7Q99884 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC6A7Q99884 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC6A7Q99884 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLC6A7Q99884 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SLC6A7Q99884 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC6A7Q99884 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC6A7Q99884 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SLC6A7Q99884 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
SLC6A7Q99884 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC6A7Q99884 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC6A7Q99884 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC6A7Q99884 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC6A7Q99884 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC6A7Q99884 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.35■□□□□ 0.85
SLC6A7Q99884 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.35■□□□□ 0.85
SLC6A7Q99884 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.34■□□□□ 0.85
SLC6A7Q99884 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC6A7Q99884 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC6A7Q99884 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SLC6A7Q99884 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC6A7Q99884 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.34■□□□□ 0.85
SLC6A7Q99884 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.34■□□□□ 0.85
SLC6A7Q99884 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SLC6A7Q99884 AC096887.2-201ENST00000623443 1957 ntBASIC20.34■□□□□ 0.85
SLC6A7Q99884 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC6A7Q99884 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SLC6A7Q99884 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.33■□□□□ 0.85
SLC6A7Q99884 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.33■□□□□ 0.85
SLC6A7Q99884 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.33■□□□□ 0.85
SLC6A7Q99884 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC6A7Q99884 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC6A7Q99884 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC6A7Q99884 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SLC6A7Q99884 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC6A7Q99884 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC6A7Q99884 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC6A7Q99884 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SLC6A7Q99884 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SLC6A7Q99884 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC6A7Q99884 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC6A7Q99884 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC6A7Q99884 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC6A7Q99884 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC6A7Q99884 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC6A7Q99884 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC6A7Q99884 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SLC6A7Q99884 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC6A7Q99884 AC007029.1-201ENST00000604183 313 ntBASIC20.31■□□□□ 0.84
SLC6A7Q99884 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC6A7Q99884 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC6A7Q99884 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SLC6A7Q99884 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.31■□□□□ 0.84
SLC6A7Q99884 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.31■□□□□ 0.84
SLC6A7Q99884 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.3■□□□□ 0.84
SLC6A7Q99884 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC6A7Q99884 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.3■□□□□ 0.84
SLC6A7Q99884 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC6A7Q99884 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SLC6A7Q99884 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.3■□□□□ 0.84
SLC6A7Q99884 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.3■□□□□ 0.84
SLC6A7Q99884 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC6A7Q99884 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC6A7Q99884 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC6A7Q99884 RARRES2P1-201ENST00000474487 481 ntBASIC20.29■□□□□ 0.84
SLC6A7Q99884 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.29■□□□□ 0.84
SLC6A7Q99884 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SLC6A7Q99884 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC6A7Q99884 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SLC6A7Q99884 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC6A7Q99884 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC6A7Q99884 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.28■□□□□ 0.84
SLC6A7Q99884 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SLC6A7Q99884 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC6A7Q99884 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC6A7Q99884 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC6A7Q99884 LINC01124-201ENST00000409786 2117 ntBASIC20.28■□□□□ 0.84
SLC6A7Q99884 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.28■□□□□ 0.84
SLC6A7Q99884 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC6A7Q99884 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC6A7Q99884 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SLC6A7Q99884 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SLC6A7Q99884 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SLC6A7Q99884 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SLC6A7Q99884 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SLC6A7Q99884 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
SLC6A7Q99884 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
SLC6A7Q99884 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
SLC6A7Q99884 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SLC6A7Q99884 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms