Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NR1H4Q96RI1 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NR1H4Q96RI1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.18■■□□□ 1.14
NR1H4Q96RI1 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
NR1H4Q96RI1 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NR1H4Q96RI1 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NR1H4Q96RI1 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
NR1H4Q96RI1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
NR1H4Q96RI1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.17■■□□□ 1.14
NR1H4Q96RI1 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NR1H4Q96RI1 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
NR1H4Q96RI1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NR1H4Q96RI1 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
NR1H4Q96RI1 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
NR1H4Q96RI1 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NR1H4Q96RI1 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
NR1H4Q96RI1 EBPL-202ENST00000378268 680 ntTSL 3 BASIC22.16■■□□□ 1.14
NR1H4Q96RI1 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
NR1H4Q96RI1 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
NR1H4Q96RI1 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
NR1H4Q96RI1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.16■■□□□ 1.14
NR1H4Q96RI1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
NR1H4Q96RI1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
NR1H4Q96RI1 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NR1H4Q96RI1 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
NR1H4Q96RI1 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
NR1H4Q96RI1 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.15■■□□□ 1.14
NR1H4Q96RI1 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
NR1H4Q96RI1 AC004812.2-201ENST00000611079 2094 ntBASIC22.15■■□□□ 1.14
NR1H4Q96RI1 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NR1H4Q96RI1 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
NR1H4Q96RI1 AC097358.2-201ENST00000607541 1159 ntBASIC22.15■■□□□ 1.14
NR1H4Q96RI1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC22.15■■□□□ 1.14
NR1H4Q96RI1 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
NR1H4Q96RI1 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
NR1H4Q96RI1 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.15■■□□□ 1.14
NR1H4Q96RI1 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
NR1H4Q96RI1 AL391121.1-201ENST00000607967 1349 ntBASIC22.14■■□□□ 1.14
NR1H4Q96RI1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
NR1H4Q96RI1 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NR1H4Q96RI1 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC22.14■■□□□ 1.13
NR1H4Q96RI1 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
NR1H4Q96RI1 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.14■■□□□ 1.13
NR1H4Q96RI1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NR1H4Q96RI1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
NR1H4Q96RI1 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NR1H4Q96RI1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
NR1H4Q96RI1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
NR1H4Q96RI1 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.13■■□□□ 1.13
NR1H4Q96RI1 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.13■■□□□ 1.13
NR1H4Q96RI1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.13■■□□□ 1.13
NR1H4Q96RI1 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NR1H4Q96RI1 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NR1H4Q96RI1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
NR1H4Q96RI1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.12■■□□□ 1.13
NR1H4Q96RI1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
NR1H4Q96RI1 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
NR1H4Q96RI1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.12■■□□□ 1.13
NR1H4Q96RI1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.12■■□□□ 1.13
NR1H4Q96RI1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
NR1H4Q96RI1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
NR1H4Q96RI1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.11■■□□□ 1.13
NR1H4Q96RI1 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
NR1H4Q96RI1 CAHM-201ENST00000604200 896 ntBASIC22.11■■□□□ 1.13
NR1H4Q96RI1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.11■■□□□ 1.13
NR1H4Q96RI1 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
NR1H4Q96RI1 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
NR1H4Q96RI1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
NR1H4Q96RI1 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
NR1H4Q96RI1 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC22.1■■□□□ 1.13
NR1H4Q96RI1 AC136428.2-201ENST00000563187 214 ntBASIC22.1■■□□□ 1.13
NR1H4Q96RI1 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
NR1H4Q96RI1 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
NR1H4Q96RI1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
NR1H4Q96RI1 AC127496.7-201ENST00000625110 1798 ntBASIC22.1■■□□□ 1.13
NR1H4Q96RI1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.09■■□□□ 1.13
NR1H4Q96RI1 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.09■■□□□ 1.13
NR1H4Q96RI1 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.08■■□□□ 1.13
NR1H4Q96RI1 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
NR1H4Q96RI1 SLC25A24-204ENST00000569674 2357 ntBASIC22.08■■□□□ 1.13
NR1H4Q96RI1 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
NR1H4Q96RI1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.07■■□□□ 1.12
NR1H4Q96RI1 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NR1H4Q96RI1 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NR1H4Q96RI1 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
NR1H4Q96RI1 DENR-202ENST00000455982 1052 ntTSL 5 BASIC22.07■■□□□ 1.12
NR1H4Q96RI1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NR1H4Q96RI1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.07■■□□□ 1.12
NR1H4Q96RI1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NR1H4Q96RI1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NR1H4Q96RI1 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
NR1H4Q96RI1 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NR1H4Q96RI1 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.06■■□□□ 1.12
NR1H4Q96RI1 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NR1H4Q96RI1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC22.06■■□□□ 1.12
NR1H4Q96RI1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
NR1H4Q96RI1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
NR1H4Q96RI1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
NR1H4Q96RI1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NR1H4Q96RI1 LINC00526-201ENST00000581067 1875 ntBASIC22.05■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms