Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
LINC00479Q96M42 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC17.96■□□□□ 0.46
LINC00479Q96M42 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LINC00479Q96M42 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LINC00479Q96M42 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LINC00479Q96M42 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LINC00479Q96M42 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
LINC00479Q96M42 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LINC00479Q96M42 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
LINC00479Q96M42 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LINC00479Q96M42 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC17.95■□□□□ 0.46
LINC00479Q96M42 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LINC00479Q96M42 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
LINC00479Q96M42 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
LINC00479Q96M42 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LINC00479Q96M42 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LINC00479Q96M42 CHST11-202ENST00000546689 756 ntTSL 2 BASIC17.94■□□□□ 0.46
LINC00479Q96M42 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LINC00479Q96M42 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LINC00479Q96M42 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LINC00479Q96M42 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LINC00479Q96M42 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LINC00479Q96M42 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LINC00479Q96M42 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.94■□□□□ 0.46
LINC00479Q96M42 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
LINC00479Q96M42 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC00479Q96M42 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC00479Q96M42 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC17.93■□□□□ 0.46
LINC00479Q96M42 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC00479Q96M42 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC17.93■□□□□ 0.46
LINC00479Q96M42 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LINC00479Q96M42 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
LINC00479Q96M42 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
LINC00479Q96M42 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC00479Q96M42 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC17.92■□□□□ 0.46
LINC00479Q96M42 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC00479Q96M42 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC17.92■□□□□ 0.46
LINC00479Q96M42 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC00479Q96M42 AC008813.1-201ENST00000536597 885 ntBASIC17.92■□□□□ 0.46
LINC00479Q96M42 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC00479Q96M42 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LINC00479Q96M42 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LINC00479Q96M42 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC00479Q96M42 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC17.91■□□□□ 0.46
LINC00479Q96M42 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC00479Q96M42 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC00479Q96M42 AC148477.6-201ENST00000623746 465 ntBASIC17.91■□□□□ 0.46
LINC00479Q96M42 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC00479Q96M42 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
LINC00479Q96M42 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC00479Q96M42 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LINC00479Q96M42 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC00479Q96M42 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC00479Q96M42 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LINC00479Q96M42 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LINC00479Q96M42 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
LINC00479Q96M42 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LINC00479Q96M42 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LINC00479Q96M42 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LINC00479Q96M42 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LINC00479Q96M42 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.9■□□□□ 0.46
LINC00479Q96M42 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
LINC00479Q96M42 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LINC00479Q96M42 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LINC00479Q96M42 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
LINC00479Q96M42 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC00479Q96M42 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LINC00479Q96M42 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
LINC00479Q96M42 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC17.89■□□□□ 0.45
LINC00479Q96M42 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
LINC00479Q96M42 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC00479Q96M42 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LINC00479Q96M42 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC17.89■□□□□ 0.45
LINC00479Q96M42 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC17.89■□□□□ 0.45
LINC00479Q96M42 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC00479Q96M42 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC17.88■□□□□ 0.45
LINC00479Q96M42 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC00479Q96M42 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC00479Q96M42 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC17.88■□□□□ 0.45
LINC00479Q96M42 CHST11-203ENST00000547956 936 ntTSL 2 BASIC17.88■□□□□ 0.45
LINC00479Q96M42 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
LINC00479Q96M42 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LINC00479Q96M42 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
LINC00479Q96M42 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC00479Q96M42 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.87■□□□□ 0.45
LINC00479Q96M42 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC00479Q96M42 CLDN5-201ENST00000403084 2357 ntBASIC17.87■□□□□ 0.45
LINC00479Q96M42 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC17.87■□□□□ 0.45
LINC00479Q96M42 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
LINC00479Q96M42 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.87■□□□□ 0.45
LINC00479Q96M42 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC17.87■□□□□ 0.45
LINC00479Q96M42 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC00479Q96M42 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
LINC00479Q96M42 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.86■□□□□ 0.45
LINC00479Q96M42 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC00479Q96M42 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
LINC00479Q96M42 DUX4L13-201ENST00000554103 1267 ntBASIC17.86■□□□□ 0.45
LINC00479Q96M42 DUX4L15-201ENST00000611059 1267 ntBASIC17.86■□□□□ 0.45
LINC00479Q96M42 DUX4L23-201ENST00000615195 1269 ntBASIC17.86■□□□□ 0.45
LINC00479Q96M42 DUX4L24-201ENST00000617576 1269 ntBASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms