Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.26■□□□□ 0.83
SPG11Q96JI7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SPG11Q96JI7 AF213884.3-201ENST00000563833 479 ntBASIC20.26■□□□□ 0.83
SPG11Q96JI7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.26■□□□□ 0.83
SPG11Q96JI7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SPG11Q96JI7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.25■□□□□ 0.83
SPG11Q96JI7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.25■□□□□ 0.83
SPG11Q96JI7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPG11Q96JI7 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SPG11Q96JI7 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SPG11Q96JI7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SPG11Q96JI7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SPG11Q96JI7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SPG11Q96JI7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPG11Q96JI7 AC024257.2-201ENST00000549699 147 ntBASIC20.24■□□□□ 0.83
SPG11Q96JI7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPG11Q96JI7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SPG11Q96JI7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPG11Q96JI7 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.24■□□□□ 0.83
SPG11Q96JI7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.24■□□□□ 0.83
SPG11Q96JI7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SPG11Q96JI7 AL355001.2-201ENST00000620617 1191 ntBASIC20.23■□□□□ 0.83
SPG11Q96JI7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SPG11Q96JI7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.23■□□□□ 0.83
SPG11Q96JI7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPG11Q96JI7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SPG11Q96JI7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SPG11Q96JI7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPG11Q96JI7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SPG11Q96JI7 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.22■□□□□ 0.83
SPG11Q96JI7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SPG11Q96JI7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SPG11Q96JI7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.22■□□□□ 0.83
SPG11Q96JI7 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SPG11Q96JI7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPG11Q96JI7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SPG11Q96JI7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SPG11Q96JI7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SPG11Q96JI7 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SPG11Q96JI7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPG11Q96JI7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPG11Q96JI7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPG11Q96JI7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.2■□□□□ 0.82
SPG11Q96JI7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.2■□□□□ 0.82
SPG11Q96JI7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.2■□□□□ 0.82
SPG11Q96JI7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.2■□□□□ 0.82
SPG11Q96JI7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.2■□□□□ 0.82
SPG11Q96JI7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SPG11Q96JI7 AC097381.1-201ENST00000429019 1296 ntBASIC20.19■□□□□ 0.82
SPG11Q96JI7 MIR6821-201ENST00000617625 74 ntBASIC20.19■□□□□ 0.82
SPG11Q96JI7 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC20.19■□□□□ 0.82
SPG11Q96JI7 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.19■□□□□ 0.82
SPG11Q96JI7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SPG11Q96JI7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPG11Q96JI7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
SPG11Q96JI7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPG11Q96JI7 AC105265.2-201ENST00000467189 838 ntBASIC20.18■□□□□ 0.82
SPG11Q96JI7 UNC93B3-201ENST00000308076 687 ntBASIC20.18■□□□□ 0.82
SPG11Q96JI7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.18■□□□□ 0.82
SPG11Q96JI7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SPG11Q96JI7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SPG11Q96JI7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SPG11Q96JI7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SPG11Q96JI7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.17■□□□□ 0.82
SPG11Q96JI7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SPG11Q96JI7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.17■□□□□ 0.82
SPG11Q96JI7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SPG11Q96JI7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPG11Q96JI7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
SPG11Q96JI7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.16■□□□□ 0.82
SPG11Q96JI7 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.16■□□□□ 0.82
SPG11Q96JI7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
SPG11Q96JI7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPG11Q96JI7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SPG11Q96JI7 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPG11Q96JI7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SPG11Q96JI7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPG11Q96JI7 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SPG11Q96JI7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.15■□□□□ 0.82
SPG11Q96JI7 DRD5P2-201ENST00000421395 2012 ntBASIC20.15■□□□□ 0.82
SPG11Q96JI7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPG11Q96JI7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPG11Q96JI7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPG11Q96JI7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SPG11Q96JI7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.15■□□□□ 0.82
SPG11Q96JI7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPG11Q96JI7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.14■□□□□ 0.82
SPG11Q96JI7 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SPG11Q96JI7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
SPG11Q96JI7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SPG11Q96JI7 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.14■□□□□ 0.82
SPG11Q96JI7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
SPG11Q96JI7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.14■□□□□ 0.81
SPG11Q96JI7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SPG11Q96JI7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.14■□□□□ 0.81
SPG11Q96JI7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPG11Q96JI7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SPG11Q96JI7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.13■□□□□ 0.81
SPG11Q96JI7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.13■□□□□ 0.81
SPG11Q96JI7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms