Protein–RNA interactions for Protein: Q96AK3

APOBEC3D, DNA dC->dU-editing enzyme APOBEC-3D, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3DQ96AK3 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
APOBEC3DQ96AK3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
APOBEC3DQ96AK3 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.41■□□□□ 0.86
APOBEC3DQ96AK3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
APOBEC3DQ96AK3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.41■□□□□ 0.86
APOBEC3DQ96AK3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
APOBEC3DQ96AK3 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
APOBEC3DQ96AK3 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
APOBEC3DQ96AK3 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.41■□□□□ 0.86
APOBEC3DQ96AK3 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
APOBEC3DQ96AK3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
APOBEC3DQ96AK3 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.41■□□□□ 0.86
APOBEC3DQ96AK3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
APOBEC3DQ96AK3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
APOBEC3DQ96AK3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
APOBEC3DQ96AK3 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.4■□□□□ 0.86
APOBEC3DQ96AK3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
APOBEC3DQ96AK3 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
APOBEC3DQ96AK3 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
APOBEC3DQ96AK3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
APOBEC3DQ96AK3 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.4■□□□□ 0.86
APOBEC3DQ96AK3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.4■□□□□ 0.86
APOBEC3DQ96AK3 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.4■□□□□ 0.86
APOBEC3DQ96AK3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.4■□□□□ 0.86
APOBEC3DQ96AK3 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.4■□□□□ 0.86
APOBEC3DQ96AK3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.4■□□□□ 0.86
APOBEC3DQ96AK3 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
APOBEC3DQ96AK3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
APOBEC3DQ96AK3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
APOBEC3DQ96AK3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
APOBEC3DQ96AK3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
APOBEC3DQ96AK3 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
APOBEC3DQ96AK3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.39■□□□□ 0.85
APOBEC3DQ96AK3 ATP5G2P3-201ENST00000429083 425 ntBASIC20.39■□□□□ 0.85
APOBEC3DQ96AK3 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
APOBEC3DQ96AK3 AC139795.1-202ENST00000500444 432 ntBASIC20.39■□□□□ 0.85
APOBEC3DQ96AK3 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
APOBEC3DQ96AK3 DUX4L18-201ENST00000553347 1267 ntBASIC20.39■□□□□ 0.85
APOBEC3DQ96AK3 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.39■□□□□ 0.85
APOBEC3DQ96AK3 AC138932.3-201ENST00000567634 1902 ntBASIC20.39■□□□□ 0.85
APOBEC3DQ96AK3 AP003733.4-201ENST00000623785 1697 ntBASIC20.38■□□□□ 0.85
APOBEC3DQ96AK3 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
APOBEC3DQ96AK3 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
APOBEC3DQ96AK3 AC004987.1-201ENST00000428627 508 ntBASIC20.38■□□□□ 0.85
APOBEC3DQ96AK3 AC135731.1-201ENST00000569415 2548 ntBASIC20.38■□□□□ 0.85
APOBEC3DQ96AK3 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
APOBEC3DQ96AK3 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
APOBEC3DQ96AK3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.38■□□□□ 0.85
APOBEC3DQ96AK3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
APOBEC3DQ96AK3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.38■□□□□ 0.85
APOBEC3DQ96AK3 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
APOBEC3DQ96AK3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
APOBEC3DQ96AK3 TSPY13P-201ENST00000338964 914 ntBASIC20.37■□□□□ 0.85
APOBEC3DQ96AK3 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
APOBEC3DQ96AK3 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
APOBEC3DQ96AK3 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
APOBEC3DQ96AK3 AC012354.3-201ENST00000623734 483 ntBASIC20.37■□□□□ 0.85
APOBEC3DQ96AK3 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
APOBEC3DQ96AK3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
APOBEC3DQ96AK3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
APOBEC3DQ96AK3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
APOBEC3DQ96AK3 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
APOBEC3DQ96AK3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
APOBEC3DQ96AK3 LONRF2P2-201ENST00000439212 571 ntBASIC20.36■□□□□ 0.85
APOBEC3DQ96AK3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
APOBEC3DQ96AK3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
APOBEC3DQ96AK3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.35■□□□□ 0.85
APOBEC3DQ96AK3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.35■□□□□ 0.85
APOBEC3DQ96AK3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.35■□□□□ 0.85
APOBEC3DQ96AK3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
APOBEC3DQ96AK3 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
APOBEC3DQ96AK3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
APOBEC3DQ96AK3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
APOBEC3DQ96AK3 MIR6089-201ENST00000616698 64 ntBASIC20.35■□□□□ 0.85
APOBEC3DQ96AK3 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
APOBEC3DQ96AK3 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
APOBEC3DQ96AK3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
APOBEC3DQ96AK3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.34■□□□□ 0.85
APOBEC3DQ96AK3 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
APOBEC3DQ96AK3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
APOBEC3DQ96AK3 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
APOBEC3DQ96AK3 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
APOBEC3DQ96AK3 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
APOBEC3DQ96AK3 AL592295.1-201ENST00000400984 884 ntBASIC20.34■□□□□ 0.85
APOBEC3DQ96AK3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.34■□□□□ 0.85
APOBEC3DQ96AK3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
APOBEC3DQ96AK3 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
APOBEC3DQ96AK3 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
APOBEC3DQ96AK3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.33■□□□□ 0.85
APOBEC3DQ96AK3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
APOBEC3DQ96AK3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.33■□□□□ 0.85
APOBEC3DQ96AK3 BHLHE23-202ENST00000612929 1109 ntBASIC20.33■□□□□ 0.85
APOBEC3DQ96AK3 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.33■□□□□ 0.84
APOBEC3DQ96AK3 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
APOBEC3DQ96AK3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
APOBEC3DQ96AK3 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
APOBEC3DQ96AK3 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.32■□□□□ 0.84
APOBEC3DQ96AK3 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.32■□□□□ 0.84
APOBEC3DQ96AK3 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.32■□□□□ 0.84
APOBEC3DQ96AK3 AC019171.1-201ENST00000601251 1056 ntBASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms