Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP3S1Q92572 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP3S1Q92572 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP3S1Q92572 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP3S1Q92572 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
AP3S1Q92572 AL117328.2-201ENST00000624617 1940 ntBASIC20.74■□□□□ 0.91
AP3S1Q92572 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
AP3S1Q92572 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
AP3S1Q92572 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP3S1Q92572 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.73■□□□□ 0.91
AP3S1Q92572 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
AP3S1Q92572 AC005559.1-201ENST00000589661 871 ntBASIC20.73■□□□□ 0.91
AP3S1Q92572 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
AP3S1Q92572 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.73■□□□□ 0.91
AP3S1Q92572 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP3S1Q92572 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
AP3S1Q92572 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP3S1Q92572 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
AP3S1Q92572 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
AP3S1Q92572 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP3S1Q92572 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP3S1Q92572 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP3S1Q92572 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
AP3S1Q92572 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
AP3S1Q92572 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP3S1Q92572 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
AP3S1Q92572 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
AP3S1Q92572 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP3S1Q92572 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP3S1Q92572 AC004812.2-201ENST00000611079 2094 ntBASIC20.71■□□□□ 0.91
AP3S1Q92572 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
AP3S1Q92572 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
AP3S1Q92572 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
AP3S1Q92572 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
AP3S1Q92572 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.71■□□□□ 0.91
AP3S1Q92572 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.7■□□□□ 0.9
AP3S1Q92572 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AP3S1Q92572 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
AP3S1Q92572 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AP3S1Q92572 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.7■□□□□ 0.9
AP3S1Q92572 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.7■□□□□ 0.9
AP3S1Q92572 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AP3S1Q92572 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.7■□□□□ 0.9
AP3S1Q92572 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
AP3S1Q92572 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.69■□□□□ 0.9
AP3S1Q92572 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.69■□□□□ 0.9
AP3S1Q92572 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
AP3S1Q92572 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
AP3S1Q92572 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
AP3S1Q92572 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
AP3S1Q92572 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
AP3S1Q92572 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
AP3S1Q92572 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
AP3S1Q92572 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
AP3S1Q92572 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
AP3S1Q92572 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.68■□□□□ 0.9
AP3S1Q92572 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.68■□□□□ 0.9
AP3S1Q92572 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.68■□□□□ 0.9
AP3S1Q92572 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
AP3S1Q92572 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
AP3S1Q92572 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
AP3S1Q92572 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
AP3S1Q92572 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
AP3S1Q92572 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
AP3S1Q92572 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
AP3S1Q92572 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
AP3S1Q92572 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
AP3S1Q92572 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
AP3S1Q92572 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
AP3S1Q92572 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
AP3S1Q92572 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
AP3S1Q92572 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
AP3S1Q92572 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
AP3S1Q92572 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
AP3S1Q92572 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
AP3S1Q92572 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.65■□□□□ 0.9
AP3S1Q92572 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
AP3S1Q92572 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
AP3S1Q92572 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.65■□□□□ 0.9
AP3S1Q92572 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
AP3S1Q92572 C9orf163-202ENST00000624034 2573 ntBASIC20.64■□□□□ 0.9
AP3S1Q92572 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
AP3S1Q92572 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
AP3S1Q92572 ABCB10P4-201ENST00000566803 2184 ntBASIC20.64■□□□□ 0.89
AP3S1Q92572 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.64■□□□□ 0.89
AP3S1Q92572 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
AP3S1Q92572 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
AP3S1Q92572 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
AP3S1Q92572 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
AP3S1Q92572 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
AP3S1Q92572 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
AP3S1Q92572 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
AP3S1Q92572 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
AP3S1Q92572 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
AP3S1Q92572 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.63■□□□□ 0.89
AP3S1Q92572 AC136428.2-201ENST00000563187 214 ntBASIC20.63■□□□□ 0.89
AP3S1Q92572 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.63■□□□□ 0.89
AP3S1Q92572 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
AP3S1Q92572 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
AP3S1Q92572 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms